Lates calcarifer (barramundi perch): 108883745
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Entry
108883745 CDS
T04895
Symbol
sec22ba
Name
(RefSeq) vesicle-trafficking protein SEC22b-A
KO
K08517
vesicle transport protein SEC22
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
lcf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108883745 (sec22ba)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108883745 (sec22ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108883745 (sec22ba)
Membrane trafficking [BR:
lcf04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
108883745 (sec22ba)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Motif
Other DBs
NCBI-GeneID:
108883745
NCBI-ProteinID:
XP_018532725
UniProt:
A0A4W6FJD5
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Position
LG4:complement(17292891..17295628)
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AA seq
215 aa
AA seq
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MILLTMIARVADGLPLAASIQEDEQSGRDLQQYQTQAKQLCRKLNAQSPDRCTLEAGDMN
FHYLISQGVCYLSLCEASFPKKMVFAYLEDLHNEFHDQYGRKVPTVTRPYSFIEFDTYIQ
KTKKTYVDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDTKASNLSSLSKKY
RSDAKYLNTRSTYAKVAAVSVFFLTLIVYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgattttactgacgatgatcgctcgtgtggcggacggactgccgctcgctgcgtccata
caggaggatgaacagtcagggagagacctccagcagtaccagacccaagccaagcagctg
tgccgtaaactgaacgctcagagtccggaccgctgcaccctggaggccggggacatgaac
tttcactatctaatatcacaaggtgtgtgctacctgtccctctgtgaggcttcatttcct
aaaaagatggtttttgcgtaccttgaagatctccacaatgagttccatgaccagtatgga
agaaaagtgcccacagtgacgaggccatactctttcattgagtttgacacatacatccag
aaaacaaagaagacatacgttgacagcagagccaggaggaacctgggcagtatcaacaca
gagctacaggacgtccagagaattatggtggcaaatattgaagaagttctgcaaagagga
gaggctctttctgctcttgacacaaaagcaagcaatctgtcatccctgtcaaagaagtac
cgcagcgatgccaaatacctcaacactcgctccacgtatgccaaggtggctgcagtgtca
gtgttcttccttacactcatcgtctatgtgcgcttctggtggctctga
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