Lates calcarifer (barramundi perch): 108883751
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Entry
108883751 CDS
T04895
Name
(RefSeq) sorting nexin-16 isoform X1
KO
K17928
sorting nexin-16
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108883751
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108883751
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
DUF641
KLRAQ
ATG16
PUMA_CC
MG280
C2CH-4th_BIRD-IDD
Fez1
Motif
Other DBs
NCBI-GeneID:
108883751
NCBI-ProteinID:
XP_018532734
UniProt:
A0AAJ7PMN7
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Position
LG4:complement(17363952..17374087)
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AA seq
310 aa
AA seq
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MAASFVPVPFPLDWTGSYRSWIKKISPINTNSSSNNCGPSSPESIPQVRGHGPWGAASGA
LTPDDSWRRLRGGLLLGSSTQLDGDRTLESWVERPITPTLLGYEVLEERAKFTVYKILVT
GSQGDSWVIFRRYTDFCRLSDKLKELFPSCCPALPPKRWFKDNYNEEFLEERQIGLQTFL
QNMMLHKDIINSEVVRHFLCLVDPPSPFDSLEESRAFCETLEETNHRLQTELLEKQREAD
TLRKTLEKRENHISLLVKRVKSLSFSSESLESQCEKMAAIVTDADTQRKTGTEMDICKNT
LRWMMAGDTQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcctttgttccagtcccattccccttggattggacagggtcgtacaggtcc
tggattaagaagatatcccccattaatacaaattcttcatccaacaactgtggtccttca
tctccagaaagtattccccaggtgagaggacatggaccctggggtgctgcaagtggggct
cttaccccagatgactcctggaggagactcagaggaggtttgttacttgggtcatccaca
cagctggatggcgataggaccctcgaaagctgggtggagagacccatcaccccaacactg
ctgggctacgaggtcctggaggagagggcaaagttcacagtttataagatcctggtgaca
gggagtcaaggagacagctgggtgatcttcagaagatacacagacttctgcaggctgagc
gacaagctaaaagagctgttccccagctgttgtccagccttgcctcctaagcgctggttc
aaagacaactacaatgaggagttcctagaggagaggcagatcggactgcagacgtttctg
cagaacatgatgttacacaaagacatcatcaacagtgaagttgtcagacactttctgtgt
ttggttgacccgccgagtccatttgacagtctggaggagagtagggctttttgtgagaca
ctggaggagactaaccatcgtcttcaaaccgaacttctggaaaaacagagagaagctgac
actttgaggaagactctggagaagagggagaaccacatcagcctgctggtgaagagagtg
aaatccctgtcattttcttctgagagccttgagagtcaatgtgagaaaatggcagcaata
gtcacagacgctgacacacagaggaagacaggcacagaaatggatatatgcaaaaacaca
ctgaggtggatgatggcaggggatactcaataa
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