Lates calcarifer (barramundi perch): 108883761
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Entry
108883761 CDS
T04895
Symbol
b3gnt5b
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase B
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00601
Glycosphingolipid biosynthesis - lacto and neolacto series
lcf01100
Metabolic pathways
Module
lcf_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
lcf_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108883761 (b3gnt5b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108883761 (b3gnt5b)
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
108883761 (b3gnt5b)
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
108883761 (b3gnt5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
DUF7621
Motif
Other DBs
NCBI-GeneID:
108883761
NCBI-ProteinID:
XP_018532744
UniProt:
A0A4W6FNN0
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Position
LG4:complement(17426220..17433503)
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AA seq
387 aa
AA seq
DB search
MFLKFRRIRRCQCMQLMTTCLVLSVVMVCWEQLDNSVVSHVKSYSYRYLVNRFIYINKSL
TIPREQARSFSNFQYLLDHPDKCAGKDVLLLLFVKTSPENIERRNAIRSTWGNETYIQNT
LGVTVKVVFALGVPQTKKEEPSWSKRSGIGFQEQLVHEDSLHGDLIQQDFLDSFHNLTLK
LILQFHWMHSRCAHARFLMTADDDIFVHMPNLVSYLQDMSSRGVTDFWIGRVHRGAPPIR
SKDSKYYVPFEMYQWLAYPDYTAGAGYVVSGDVADKVYQATLTLNASIYIDDVFMGICAN
AIGVTPQEHVYFSGEGKAPYHPCIYDQMMTSHGHVEDIYDLWKAATHPQVKQRTSGLMGR
LYCTAVKMALLCKPYYFNTYPCKAAFF
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgaaattccgccgaatacgaagatgccagtgcatgcagctgatgaccacctgc
ctggtgttgtcagtggtgatggtttgctgggagcaactggacaacagcgtcgtcagccac
gtcaaatcctactcctaccgctacctagtcaaccgcttcatctacatcaacaagagcctc
accatcccacgcgagcaggcaagaagcttcagcaactttcaatatctgctggaccaccca
gataagtgtgccggaaaggacgtcctcctcctcctctttgtcaaaacgtccccagagaac
attgagagacggaatgccatcagatcgacctggggtaatgagacctacatccaaaacacc
ctgggagtgacagttaaggtggtgtttgccttaggagtgcctcagaccaagaaggaggag
ccctcatggagtaagaggagtggaatcggcttccaggaacaactcgtccacgaggacagt
ctccacggtgatttgatccaacaagacttcttagactccttccacaacctgaccctgaag
ctcatcctgcagttccactggatgcacagccgctgcgcacacgcccgcttcctcatgacc
gctgacgacgacatcttcgtccacatgcccaacctggtgagttacctgcaggacatgagc
agcaggggcgtcacagacttctggattggtcgagtgcacagaggggcgccacccatccgc
agcaaagacagcaagtactacgtgccctttgagatgtaccagtggttggcgtatcctgac
tacacggctggagctgggtatgttgtctccggcgatgtagcggacaaagtctatcaagct
acactgaccctgaacgcctctatttacatagatgatgtgttcatgggcatctgcgctaac
gccattggtgtgaccccacaagagcacgtctatttctcaggggagggcaaagcgccttac
cacccttgtatctatgaccagatgatgacctctcatggtcacgtggaggatatctatgac
ctgtggaaggcggcaacacacccacaggtgaaacagaggacctctggactcatgggcagg
ctgtactgcaccgcagtgaaaatggcgctactctgtaaaccttactattttaacacatat
ccctgcaaagcagcctttttttag
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