Lates calcarifer (barramundi perch): 108883786
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Entry
108883786 CDS
T04895
Name
(RefSeq) beta-1,3-galactosyltransferase 2
KO
K07820
beta-1,3-galactosyltransferase 2 [EC:
2.4.1.86
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00601
Glycosphingolipid biosynthesis - lacto and neolacto series
lcf01100
Metabolic pathways
Module
lcf_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108883786
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108883786
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.86 N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase
108883786
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
Type 1 chain
108883786
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GFIT
Motif
Pfam:
Galactosyl_T
B3GALT2_N
Cytadhesin_P30
Motif
Other DBs
NCBI-GeneID:
108883786
NCBI-ProteinID:
XP_018532782
UniProt:
A0AAJ7LX90
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Position
LG4:17699137..17702934
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AA seq
418 aa
AA seq
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MQWKRRHCCTHTAKLLYLLSLLGVLVFLVHQEWLPRLTGMPWRRGHPVVYGGSRLHTTKA
KLNMSSQHSVWRFVIIPQPTFKTDANISSHEKEGVSSPQGDLAANTSQSEEGDLSGTITH
GPFPYIINEPDKCAENRPVPFLVLLIATEARKVEARNAIRQTWGNESVGAALGFIRLFML
GKNEGELGLLQQRMLIAESQRHHDIIQQDFLDTYKNLTIKTLMGMNWVAMHCPRASYVMK
TDSDMFVNTEYLIYKLLRPELKPKRNYFTGYNMRGFAPNRNKNSKWYMPPELYPGDKYPT
FCSGTGYVFSGDLARKIYRASLSIRHLHLEDVYVGVCLAKLQIEPMPPPNEFLFNHWRVS
YSSCKYSHLITSHGFHPNELLKYWHHLQSNKPNACINTIKERVGRTHSSRKNRKKQAQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggaaacgacgccactgctgtacgcacacagctaaacttctctatctcctctca
ctgttgggtgtactggtctttctggtccaccaggagtggctgcctaggctcacaggtatg
ccatggcggagaggccatcctgtggtgtacggaggaagcagacttcatactaccaaagcc
aaacttaacatgagctctcaacattcagtgtggaggtttgtcattattcctcagccgact
tttaaaactgacgccaacatcagctcccatgagaaggagggtgtctcctctcctcaagga
gacctggcagccaacacaagccaaagtgaagagggagacctaagtggcacaataactcac
gggccttttccttatatcatcaatgagccagacaaatgtgcagagaatagaccggtgcca
tttctagtgttgctgatagccactgaggctcgaaaggtagaggcaaggaatgccatacgg
caaacatgggggaatgagagtgttggcgcggctctgggattcatccgacttttcatgttg
ggaaaaaatgagggagagctagggcttttacagcaaaggatgctaatagcagagagccaa
aggcatcacgatataattcagcaggactttctggacacctacaaaaacctgaccataaag
acgttgatgggaatgaactgggtggcgatgcactgcccacgagccagctatgttatgaag
acagacagcgacatgtttgtcaacacagagtacctcatttataagctgctcaggccagaa
ctgaagcccaagaggaactacttcacaggctataacatgagaggctttgcacccaaccga
aataaaaacagcaagtggtacatgcccccagagctgtacccaggtgacaagtaccccacc
ttctgctctgggactggttacgtcttctctggagacttggcgaggaaaatctatcgagca
tctctaagtatccgccacctgcatctagaggatgtgtatgtgggagtatgcctggccaag
ctccagatcgagcccatgccaccacccaatgagttcctattcaaccactggcgagtgtct
tattccagctgcaagtacagtcatctgataacgtcgcatgggtttcatcccaatgaacta
ctaaaatactggcatcacctgcaaagcaacaaacccaacgcctgtatcaacacaattaaa
gagagagtgggcaggacgcactcaagcagaaagaatagaaagaaacaagcccagtaa
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