Lates calcarifer (barramundi perch): 108883799
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Entry
108883799 CDS
T04895
Symbol
serbp1b
Name
(RefSeq) plasminogen activator inhibitor 1 RNA-binding protein isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108883799 (serbp1b)
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108883799 (serbp1b)
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Ortholog
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GFIT
Motif
Pfam:
IHABP4_N
HABP4_PAI-RBP1
SrfA
Motif
Other DBs
NCBI-GeneID:
108883799
NCBI-ProteinID:
XP_018532799
UniProt:
A0AAJ7LWX5
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Position
LG4:17896106..17903241
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AA seq
404 aa
AA seq
DB search
MPGHLQEGFGCVVTNRFDQLLDDESDPFEILKAAENKKKEGAAAGSTKTAAQAAKQPKKE
SQKDRKNPLLDKKEESQAPVPLKKEGIRRVGRRPDQQGQPGSQHQGGQGEGRPGDKRPDR
RPPRERRFEKPAEDKPEGGGEFSADKPSGDRPPRGRGGGRGGRGGRGRGMGRGEGFDSRG
KRDFDRHSGSDKSNQKTEEKRSGSGSHNWGNVKDEVSEAEQTAAPETTPEGEENAPAGSE
NKENEVEEVKNEGPREMTLDEWKAMQDKERTKVEFNIRKPNEGADSQWKKGYVLHKSKSE
DRPVGALIDASETEADSHTLYHKATADESSDHHFRKPANDITSQLEINFGDLGRPGRGRG
GARGGRGGRGGGGSRTARGGGRSDKASGVSVPNVDDPEAFPALA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacacctgcaagaaggcttcggctgcgtcgtaaccaaccggttcgaccagtta
ttggacgatgagtccgacccgttcgagatcctgaaagctgctgaaaacaagaagaaggag
ggggccgccgctggttctaccaagaccgcggctcaagccgccaagcagccgaagaaggag
tcacagaaggacaggaagaacccgctgctggacaagaaggaagagtcccaggctccagtc
cccctgaagaaagagggtatcaggcgggtgggccgaagaccagaccagcagggccagcct
ggttcccagcaccagggtgggcagggcgaagggcgacctggagacaagaggccggaccgg
agacctccccgagagcgtcgtttcgagaagcccgctgaggacaagcctgagggaggtgga
gagttctctgcagacaagccttctggagacaggcccccgagagggcgtggtggcggccgg
ggtgggcgtggtggaagaggacggggcatgggccgaggagaaggcttcgactcccgtggg
aaacgagactttgacagacacagtggcagtgacaaatccaatcagaaaactgaggagaag
cgcagtggcagtggctcacacaactggggcaatgtgaaggatgaagtgagtgaggctgaa
cagactgctgctcctgagacgaccccagagggcgaggagaacgcacctgccggctccgag
aacaaggagaatgaggttgaagaagttaagaatgaaggccccagagaaatgaccctggac
gagtggaaggccatgcaggacaaggagcgcaccaaggtggagttcaacatccgcaagccc
aacgagggagctgacagccaatggaagaaaggatacgtgctgcacaagtccaagagtgaa
gataggcccgttggtgctttgattgacgcctcagagacggaagcagactcacacactctg
taccacaaggccaccgccgacgagtccagtgaccaccatttccgcaaaccagccaacgac
atcacatctcagctggagatcaactttggagatcttggccgccccggccgcgggcgtggg
ggagcgcgcggaggcagagggggccgcggcgggggaggcagcaggacggcacgcggggga
ggacggtccgacaaggctagtggagtgtcagtccccaacgtggatgatcctgaggccttc
ccagctctggcctaa
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