Lates calcarifer (barramundi perch): 108883827
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Entry
108883827 CDS
T04895
Symbol
fzr1b
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04110
Cell cycle
lcf04120
Ubiquitin mediated proteolysis
lcf04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108883827 (fzr1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108883827 (fzr1b)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
108883827 (fzr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108883827 (fzr1b)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
108883827 (fzr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_IFT80_2nd
Beta-prop_SPT8
Ge1_WD40
Beta-prop_VPS8
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
108883827
NCBI-ProteinID:
XP_018532853
UniProt:
A0A4W6BPZ3
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Position
LG4:18281650..18286957
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AA seq
487 aa
AA seq
DB search
MDQEYERRLLRQINHQNLPTEARLSKCVSATCSPVSVKSGDRFIPTRAGSNWSINFHYAN
ENCRSPSQNHKAKDASSDSSKDTVAYAALLRNELLGAGIETVPDPHTDDRRHAVLAQDSH
SLFRYTVHTKRVPFDSDNEVSPYSLSPLSNKSHKLLRSPRKPARKISKIPFKVLDAPELQ
DDFYLNLVDWSAGNLLSVGLGACVYLWSACTSQVTRLCDLSVDGDSVTSVCWNERGSLVA
VGTHKGYVQIWDAAGGRKLTSLEGHSARVGALAWNGEQLSSGSRDRVILQRDVRTPPSAE
RRLQGHRQEVCGLKWSPDHQHLASGGNDNKLLVWNSSSLLPVQQYSDHLAAVKAIAWSPH
QHGLLASGGGTADRCLRFWNTLTGQALQSTDTGSQVCNLAWSKHANELVSTHGYSQNQIL
VWKYPSLTQVAKLTGHSYRVLYLAVSPDGEAIVTGAGDETLRFWNVFSKTRCTKESKSVL
NLFTRIR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagagtacgagagacgactgctcaggcaaattaaccaccagaacctgccgaca
gaggcccgcctgtcaaagtgtgtaagtgccacctgcagtcctgtcagtgttaagtcagga
gaccgcttcatccccacccgagctggaagcaactggagcatcaacttccactacgctaat
gagaactgtcgctctcccagtcagaaccacaaagcgaaggatgccagttcagattcaagc
aaagacactgtggcgtatgccgccctgttgaggaatgagttgctgggggcagggatagag
acagtgccggaccctcacactgacgaccggcggcatgcagtccttgctcaagactctcac
agcctttttaggtacactgtccacactaagagagtgcctttcgatagcgataatgaagtc
tcaccatactccctttctccacttagtaacaaaagtcacaagctgctccgttcccctcgt
aaaccagcccggaagatctccaagatccccttcaaagtgctggacgctccggagctgcag
gatgacttctacctcaacctggtagactggtcggcgggcaacctgctcagtgtcggactg
ggagcctgcgtctacctgtggagtgcctgcaccagccaggtgacaaggttatgtgatctt
tcagtggatggagactctgttacatcagtttgttggaacgagaggggaagtctggtcgct
gttggaacccacaagggttacgttcagatctgggacgcagctggagggaggaagctgacc
agtctggagggtcactcagcccgtgtaggtgccctggcatggaatggggagcagctgtcg
tcgggaagtcgggacagagtgatcctccagcgggacgtcagaacccccccttctgctgag
aggaggctgcaaggtcacaggcaagaagtgtgcggcctcaaatggtctcctgaccaccag
cacctcgcctccggaggcaatgacaacaagttattggtgtggaacagctccagcctgctc
cctgtgcagcagtacagtgaccacctagcagcggtcaaggccatcgcctggtccccccac
cagcacgggctgctggcgtctgggggcggcaccgccgaccgctgcctgcgcttctggaac
acgctgacgggtcaggcgctgcagagcacagacacgggctcccaggtctgcaacttggca
tggtccaaacacgccaatgaactggtgagcactcacggctactcccagaaccagatcctg
gtgtggaagtatccgtcactaacacaggtggccaagctgacaggacactcctacagagtg
ttgtatctggctgtgtcaccggatggggaggctatcgttacaggagctggggatgagaca
ctacgtttctggaacgtcttcagtaagacacgctgcaccaaggaatcaaagtcagtgctg
aacctcttcacaagaatacgatag
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integrated database retrieval system