KEGG   Lates calcarifer (barramundi perch): 108883996
Entry
108883996         CDS       T04895                                 
Symbol
zc3h12ab
Name
(RefSeq) ribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108883996 (zc3h12ab)
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     108883996 (zc3h12ab)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH zf-CCCH_4
Other DBs
NCBI-GeneID: 108883996
NCBI-ProteinID: XP_018533103
UniProt: A0A4W6CCM9
LinkDB
Position
LG3:17521788..17533680
AA seq 664 aa
MGCTEEEEMNADVAVFPSIHPWSKIPTTTCLNLTDSDTPAWIVPPSLPVQNSSSPSCEKM
YPGEPDQSLDPEHPESQMDFFHKLGYSTAQVLAVQQKFGPTMDTDKVLGELVRTGASREP
KQAPVTTMSVLVPRGDIQATGPTLQLPVPASSPQSREESCEDEDALRPIVIDGSNVAMSH
GNKEVFSCLGIQLAVNFFLDRGHTEVNVFVPSWRKEQPRPDVPITDQHILRDLERRKILV
FTPSRHVAGKRVVCNDDCFIVKLAYESDGIIVSNDMYRDLQRDVPEWKRFIEERLLMYSF
VNNKFMPPDDPLGRHGPTLENFLRRFPKTRKKQQCPYGKKCTYGLKCKFHHPERAKQSNR
SVADELRENAKYPPTAQKQPSACSSPVPGQSLLLVEDMAKKLTLGHEGGSPKKDHKNEHV
AQVKTSHRSSKRATSRKEKTSQHLTSDHGSGRHGGSQEKLDSGLGSIDSQPMEAPWSLCD
HQYGAPYRGCSQQTHSVQQYCSPRSAPSSCCSHGPPSWGTAPAFQPHSIRPVSNHRSDMI
PYGPPHYPGYGPYPVSMPTVYSQPADFQHARVYNHHQQAYWSDPFGGHPPAVRSLPGERS
QWEPLQGTQPSPSMEERGVIRKKLLAIFSAHLVDTAMEMFPHMMDPQMLVAEILMLQSQN
RSLR
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgggttgcacggaggaagaagagatgaatgctgacgttgctgtttttccatccatacac
ccgtggagtaaaatccccaccacaacctgtttaaacctcacagactctgacactcctgca
tggatcgtccctccatctctccctgtccaaaactcttccagtccttcctgtgagaaaatg
taccccggtgaacccgaccagtccctggaccccgagcacccagagtcccagatggacttc
ttccacaagctggggtactccacagctcaggttctcgccgtccagcagaagttcggcccc
accatggacacggataaggtcctgggagagctggtgaggactggcgcaagtcgggagccc
aagcaggcgccggtgaccacgatgtcggtgctggtgcccagaggggacatccaggccaca
ggccccaccctgcagctgcctgtccctgcatcgtctccacagagcagagaggagagctgt
gaggatgaagacgccctgagacccatcgttatagatggcagcaacgtggccatgagccac
gggaacaaggaagttttctcatgtctgggaattcagttggcagtgaacttcttcctggac
agaggccacactgaggtcaatgtgttcgttccctcgtggaggaaggagcagcctcggcca
gatgttcccattacagatcagcacattctgcgagacctggagaggaggaagatcctggtg
ttcacaccatcgaggcatgtcgcaggcaaacgggtggtctgtaacgacgactgcttcatt
gtcaagctggcctacgagtccgacggcatcatcgtgtccaacgacatgtaccgggacctt
caacgagatgtaccagagtggaagcgcttcattgaggagaggctgctcatgtactccttt
gttaataacaagtttatgcctcctgatgatcctctgggccgccatggaccgaccctggag
aacttcctgcggaggtttccaaagactcgaaaaaaacagcagtgcccttatggaaagaaa
tgtacttacggactcaaatgtaaattccaccaccctgagcgagccaaacagtccaatcgc
tcggttgccgatgagcttcgtgagaacgccaagtaccctccaactgctcagaaacaacct
tcagcttgctccagtcctgtgcctggacagagcctcttgctggtggaggatatggccaag
aaactgaccctggggcatgagggtggctctccaaagaaagaccataaaaacgaacatgta
gctcaggtgaagacgagtcaccgttccagcaagagagccacatctcgaaaggagaagacc
agccaacacttgacttctgaccacggctcagggcggcacggtggctctcaggagaagctg
gactctggtttaggctccatagatagtcagccaatggaggctccttggagtctgtgtgat
caccagtatggggcaccctacaggggctgcagtcagcagacccacagtgtacaacagtac
tgctctccaagaagtgcaccaagcagctgttgctcacatggccctccctcttgggggacc
gcaccagccttccagccccacagcatcaggccagtcagcaaccaccggtctgatatgatc
ccctatgggccgcctcattaccccggctacggtccatacccggtcagcatgcctacagtg
tacagccagccggcagacttccagcacgccagagtctacaaccaccaccagcaggcatat
tggtccgatccatttggcggtcaccctccagcggtccgcagcctaccgggggagcgctca
cagtgggagcctcttcagggtacgcaaccgagtcccagcatggaggagagaggggtcatc
cggaagaaactcctcgctatcttcagtgcccacttggtggacacggccatggaaatgttt
cctcacatgatggatccacagatgcttgttgccgaaatcctcatgctgcagagtcagaac
cggtcactgagatga

DBGET integrated database retrieval system