Lates calcarifer (barramundi perch): 108884013
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Entry
108884013 CDS
T04895
Name
(RefSeq) syntaxin-18
KO
K08492
syntaxin 18
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
lcf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108884013
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108884013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108884013
Membrane trafficking [BR:
lcf04131
]
SNARE
Syntaxin (Qa)
Stx-rER
108884013
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF4559
DUF7165
TMP_3
Motif
Other DBs
NCBI-GeneID:
108884013
NCBI-ProteinID:
XP_018533137
UniProt:
A0A4W6C0K2
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Position
LG12:complement(17735627..17752643)
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AA seq
326 aa
AA seq
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MAVDITLLFKASVKTVKTRNKAIGIGFDSTKDEIFKRSRPKSGFSPKAKEVITNITKLKD
FLLQHRKDYVSAGSLISSDLTRMTDSERDQIDQDAQIFMRTCSEAIKQLRNEAEKKVTSA
QIKEHRGAVLDLIEMYLKGVCKLYSEQRAIRVKRMVDKKRLSRLAPEQEYFTRVEKTQEV
EPTEEKAVKEESSEKNVSEVLDNTVEHLWEEGRMEDELSPEEIQMFEQENQRLVSEMNSL
VDEVRQIEGKVVEISRLQEIFAEKVLQQETEIDSIHQLVVGATENVKEGNEDIREAIKNN
AGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggatattactttactcttcaaagccagtgtcaagacagtaaaaaccagaaac
aaggcgataggaataggctttgactcaaccaaagatgaaattttcaagcggagcagaccg
aagagcggcttctctccgaaggcgaaggaagtgatcacgaacatcaccaagctcaaagac
tttctgctacaacacaggaaagattatgtgagcgccggaagtctcatctcgtcagatctc
acccgtatgactgacagtgaacgtgatcagatcgaccaggatgctcagatcttcatgagg
acgtgctccgaagccatcaagcagctacgcaatgaagcagagaagaaggtgacatcagcc
cagataaaggaacacagaggggcagtgctggacctcattgaaatgtatctgaaaggagtg
tgtaagctgtattctgagcagagagcaatcagagtcaagagaatggtggacaagaagaga
ctgtccagactggcaccagaacaagaatacttcactcgggtggagaaaacgcaagaggtg
gagcccacggaggagaaagctgtcaaagaagaaagttctgagaagaatgtgtcagaggtc
ctggacaacaccgtggaacacctgtgggaggagggccgaatggaggacgagctctctcct
gaggagatccagatgtttgagcaggaaaaccagcggctggtgagtgagatgaacagcctg
gtggatgaagtgaggcaaatcgaagggaaggtggtggagatctctcgacttcaggagatc
tttgctgagaaagtcctgcaacaagaaacggagatagacagtattcatcagctggttgtg
ggtgctacagagaacgtgaaagagggcaatgaggacatacgtgaggcaatcaaaaacaac
gctggcttccgggtatggatcctcttcttcctcgtcatgtgctccttctctctcctcttc
ctggactggtatgacagctaa
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