Lates calcarifer (barramundi perch): 108884034
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Entry
108884034 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108884034
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108884034
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
108884034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
108884034
NCBI-ProteinID:
XP_018533165
UniProt:
A0AAJ7PN29
LinkDB
All DBs
Position
LG12:18464584..18491955
Genome browser
AA seq
1835 aa
AA seq
DB search
MNPESLDSSIQSALSALFPPFEATAPIVLSQLFRTIEERYHGDALQCLLDFLIPSKHLLE
SVQQAACAGYSDVVFRCEGWPLCLHDKTVIQLAPVNPLLLRPGDFYLQVEPFGDQAARIV
LKSLLEEGCREVEETPVPETSYPCIFTEDWLQDINEGRHGTPLSRCLLCTDQGVIKLPWA
KIAIPEFLDKPKIMPTYREAPPEPKQISIPSHFNSCTLPMEAMILPAKDRMSASLKPADC
SSKLVKMEHDRHTPKSCSKPLIRPVGWVSPNTWDSRNYREIEGDYVDLVDVAKGKDLVDK
QRDSNPNPPNSALFKPVRPPPPVPLGHSVPCGHTLQYAEEPCTPCSQRKLGQELSDQDFK
CRYRESYLAALRNPVTFERGSVDLLSALEEVGLCEEGEVRPKGTIETPRDELGRICNHSK
EAVIRHELCQYKHCCEPTPENFVSHLKDLPTSSESENLMKESPIILKSTPGLSHSQRVQT
KLISHPLGHNSGVHPGSDVFLETHDGDMKPQHKMEVVKPSGKHKVKLRSLSTVSETPKGS
PLLYKLNHRSHSDICPETISSIIQCKKGELLDQVTPKLERLAGKCLVKKDSSRSETSSTT
DGTDSRLHNSSSPQVQHPCANSDTLQSPQTEESSFRKISGLLELAIICLPGSKDRTGRAV
VEVHGDRKEWTSPLVSAQNVCELLLYLHSIPRKDVRELGMTLVINARKKPPPPHLYKALL
MAQEQALHAVHSIVMLMDKDTCPRPEKQPGLQMDMVTSMKALNKTVEASQLTSDLGGTFP
YSHTDWLQFHQKLVSFMTDLRGADSLLQKAIKKVDGSRKIDTAQDVQQCIQEQRASMKEV
LEDTRLVTLQREGGAVLARMRREEFRFPQSEDYRDALESVTSLYNQVEEKLHMLVMRSNE
SLQHLEFLFRLREMEAKISTTGTWFNTEGEQRLKDSYTTEDTLVCTEKALQHFEQFLAQS
KEKQQYALTLVMEAEGIVGGSDASPATEIFRTLVSTFKSNVDGFMLRAEKRHKELDTLVY
VYRFCDQASLLANECSHFLEQVEQGCYSAQTLSTLQMYEERLGGEFSTQHFQGMKVKACG
VGSWASGVMKVWNAALVQCQEVKQCFEDRQKKKGVDKNQIQETTAANSQGEDGGMERKEK
RSDVREDERSLTPQPTSPTAVVDISENARDSTAAACFQHHLKPDLKGCEGGESQAQELPD
ATVKNEKNGLKTKWKPREYHSEADLRSADSTEVGDNFPLHKALGRSLSDGSRVSSHLPGI
SSFSPLNVRHKHCQSRMQPLEPNLQPVQNLPISHDESLRKLRRIMEELLSTEREYVKALG
YVREHYFPELERADVPQDLRGQRGSIFGNLEKLHDFHRHHFLDELESCENEPLRVGRCFL
RHRESFALYALYSKNKPQSDILLINHGQAFFKQKQLRLGDKMDLWSYLLKPVQRISKYSL
LLQDMMKECGPGQTREMAEVKAALEVIHFQLRHGNNLLAMDAIHNCDVNLKEQGQLIRQD
EFLVTFRKKKCFRHIFLFQELILFSKTRKTDVGNDTYIYKQSFKTSDIGMTQNSGDSGLC
FEIWFRKRKTQDTYILQAVSREVKEAWTKDLERILWEQAVHNREVRMQERVFMGIGNKPF
MDIQPSEAAISDRAVNYVLMGRISAENRVLSTVGSCGAQVRLPGVRPKSVGSGSSLSSSS
SSGGCSLSPEGYRCGLKRRPVVGVLAGYVSSPGALEEDDLDHESGSHNLLLDSSESSGES
VSGFSSCSHSYRSAVGGEVEDTSSVCASVITVKEAVVADRAEAPAAFHKVNALAGSPDKT
QPPLPPKPKPKPQYQAKDLPCGKVQNTCVGKTTEV
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaatctctggactcatctattcagagtgccctctcggccctcttcccgcct
tttgaggcaactgcacctatagtcctcagccagctgtttcgcaccattgaggagcgttac
cacggtgatgcattgcagtgcctgctagatttcctcatcccctccaaacacctgttggag
agtgtccaacaggcagcttgtgctggatactctgatgtggttttccgctgtgagggctgg
cctctatgtctccacgacaaaacagtcatccagttagcacctgtaaaccctttgctgctg
cgtcctggagacttctatctacaggtggaaccttttggggaccaagcagctcgtattgtc
ctaaaaagtcttctggaagagggctgtcgagaagtggaggagactcccgtgcctgaaact
tcatacccctgcatctttactgaagactggttgcaggatatcaatgaaggacgccatgga
acccctctgtcacgttgcttgctttgcacagatcaaggagtaataaagttaccctgggcc
aaaatagctatcccagagtttttggacaaacctaagatcatgcccacttatcgggaagct
cctcctgagccaaagcagatctcaattccctcccattttaactcctgcaccctaccaatg
gaagccatgattcttcctgcaaaagacaggatgtcagcatctttgaaacctgcagactgt
tcttccaaacttgtcaaaatggagcatgacagacacacacccaaatcatgctccaaacct
ttaatcagacctgtgggttgggtttctcctaatacctgggacagtcgtaactatcgggag
attgagggtgattatgtagacctggtggatgtcgccaaagggaaggacttagtggataaa
cagagagacagcaatccaaatccacccaattcagctttgttcaaacctgtcagaccacct
ccacctgtgccacttgggcacagtgttccctgtggacacacccttcagtatgcagaggag
ccttgtaccccatgcagccagagaaagctggggcaggagctctctgatcaagacttcaag
tgccggtacagagaatcttacctggcagcactgaggaaccctgtcactttcgagaggggg
agtgtagacctcttgtctgccctggaggaggttggcctttgtgaagagggggaggtaaga
cccaagggtacgattgaaactccaagagatgaacttggaagaatttgtaaccactctaaa
gaggctgtgattcgtcatgagctctgccagtacaaacactgctgtgaaccgacaccagaa
aactttgtgtctcaccttaaagaccttcctacaagttctgaatctgaaaaccttatgaag
gaatcacccataattttaaaatcaacccctggtttgagccatagtcagagagttcagaca
aaacttatttcccacccgttgggacataattctggtgtccatccaggatcagatgtgttt
ttggagacccatgatggcgacatgaaaccacagcataagatggaggttgtaaaaccatca
gggaaacacaaagttaagctgaggtctctgtccacagtgtcagagacgcctaaagggagt
cctcttctctataaactcaaccacaggagccacagtgatatctgccctgaaacaatctcc
agcataatccagtgtaagaaaggtgaactgttggatcaggtgactccgaagctggaaaga
ctggctggaaagtgtctggtaaaaaaagactcaagcaggagtgaaacttcctccaccaca
gatggaactgactccagacttcacaactcatcctctccacaagttcaacatccttgcgca
aattctgacactcttcagtctccacaaacagaagaatcaagcttcagaaaaatcagtgga
ctgcttgaattagccattatttgtttgccaggcagcaaggacaggacaggcagagcagtt
gtggaggttcatggtgacaggaaggagtggacatcgccacttgtatcagctcagaatgtg
tgcgaattgctactctacctgcactccataccaaggaaagatgttcgagagctgggaatg
acgttggtcatcaatgccaggaagaaacctcctccacctcacctctacaaagccctgctc
atggcccaggagcaagctcttcatgctgtgcacagtattgtgatgctgatggacaaagac
acttgtccacgccctgaaaaacagcctgggcttcagatggacatggtgacttctatgaaa
gccctaaacaagacagttgaggcttcccagctgacatctgacctgggcggtacctttccc
tacagccatacggactggctgcagttccatcagaaactagtttccttcatgactgacctg
cggggggccgacagcttgttgcagaaggccatcaaaaaagttgatgggagcagaaagata
gacactgcccaggatgtgcagcaatgcattcaggaacagagggcttcaatgaaagaggtg
ctagaggacactcgactggtcactctgcaaagagaaggaggagctgtactggccaggatg
aggagagaagagttcagatttccacagtctgaagactacagagatgctttggagtcagta
acaagtctgtacaaccaggtggaagagaagctccacatgctggtgatgagatcaaatgag
tctctgcagcacctggagttcctcttcaggctcagagagatggaggctaaaatcagcacg
actgggacctggtttaatacagaaggcgaacagagactgaaggactcttacacaacagag
gataccctggtgtgcactgaaaaggctttgcagcactttgagcagtttctcgctcagtct
aaggagaaacaacagtacgcactgaccctagtgatggaagcagagggaattgttggcggc
agtgacgctagtcctgcaacagaaatttttcgtaccctcgtcagcactttcaagtccaac
gtggatggttttatgttgcgggccgaaaagaggcacaaagaactggacactctggtgtat
gtgtaccgcttctgtgatcaggcgtctcttttggccaatgaatgcagtcattttttggag
caggtagagcaggggtgttactcagctcagaccctaagcacactccagatgtatgaagag
agattaggtggcgaattctccacccagcacttccagggaatgaaagttaaggcctgcggt
gtgggatcatgggcctctggggtgatgaaggtgtggaatgcagccttggtccagtgccaa
gaagtcaagcaatgttttgaggacaggcagaagaagaaaggagtagataagaaccagatc
caggagaccacagctgcaaactctcagggggaagatggaggcatggagaggaaagagaaa
aggagtgacgtacgggaggatgagcgctccctgacaccgcagccaacctctcctacagcg
gtagtcgatatctcagaaaatgcaagagacagcaccgctgctgcatgtttccagcaccat
ttaaaacctgacttgaaagggtgtgagggaggagaatcccaagcacaggaattacctgat
gcaacagttaaaaatgagaaaaacggtttaaaaaccaagtggaagccaagggagtaccac
agcgaggcagatctgaggagcgcagactctaccgaagtgggtgataattttccattgcac
aaagccttgggtcggtccctaagcgacggatcacgcgttagctcacatttaccgggcatc
tctagcttttcacctttgaatgtcagacacaaacactgtcagagcaggatgcagccactg
gaaccaaatctgcagcctgtccaaaatctgcccatttcccatgacgagagtttacggaaa
ctgcggaggataatggaggagctgctgtccacagagagagagtacgtgaaggctctgggt
tacgtccgagaacactacttccctgagctggagagggctgatgtcccacaggacctcagg
ggccagagggggagtatcttcggtaacttagaaaaactccacgacttccaccgacatcat
ttccttgatgagttggagagctgtgagaacgaacccctcagagtgggacgctgcttccta
cgacatagagagagctttgctttgtatgccctttacagcaagaacaaaccccagtcagat
attcttctcatcaaccatggacaggcttttttcaagcaaaaacagctgaggctaggggac
aaaatggacctgtggtcgtacctgctgaagcctgtgcagcgcatcagtaagtacagcctg
ctgctgcaggacatgatgaaagagtgtggtccaggacaaaccagagagatggctgaggtc
aaagctgccctagaggtcatccacttccagctccgccatggcaacaacttgctggccatg
gatgccatccacaactgtgatgttaatctgaaggaacaagggcagctgatacgccaagat
gaattcttggtaacattcagaaagaaaaaatgtttccgccacatcttcctttttcaagag
cttatcctctttagcaagacacggaagacggatgttggaaatgacacatacatctacaaa
cagtcattcaagacatcagacataggcatgacccaaaacagcggagacagtggcctgtgt
tttgagatctggttcaggaagaggaaaacccaggacacatacatactccaagcagttagc
cgtgaggtcaaggaggcttggaccaaagacctggagcggatcctttgggagcaggcagta
cacaacagagaggtccgtatgcaggagagagtgttcatgggtattggaaacaagcctttc
atggacatccaacccagtgaagcagcgatcagtgacagagccgtcaactatgtactgatg
ggaagaatctccgcagaaaacagggtgctgtccactgtgggatcatgtggggcacaggta
aggctcccaggggtgaggccaaaatctgttggttcaggaagcagtttatcttcctcctct
tcctctggaggttgttccctgtcccctgagggataccggtgtgggctaaagcggaggcca
gttgtgggggtgctcgcaggatatgtatcatcccctggagctctggaggaggatgacctg
gaccatgagagtgggagtcataacttactattggacagctctgagtcgtcaggagagagt
gtaagcggcttcagcagttgcagtcacagctaccgctctgctgttggaggagaggtggag
gatacctcctctgtctgtgcctccgtaatcactgttaaagaggctgtggttgctgatcga
gctgaagctccggcagctttccacaaagtaaacgctctggcaggatccccagacaaaacc
caaccaccacttccaccaaagcccaaacccaaaccacaataccaggccaaggatctcccc
tgtggcaaggttcagaacacttgtgttggaaaaaccacagaggtttga
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