Lates calcarifer (barramundi perch): 108884055
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Entry
108884055 CDS
T04895
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108884055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108884055
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108884055
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108884055
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108884055
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108884055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_4
Ank_3
Ank_5
PH_11
PH_21
PH_8
TPR_TTI1_N
BAR
Motif
Other DBs
NCBI-GeneID:
108884055
NCBI-ProteinID:
XP_018533219
UniProt:
A0AAJ7LXI3
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Position
LG12:complement(18863563..18919897)
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AA seq
841 aa
AA seq
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MTVDFEECIKDSPRFRAGIDDVETDVVEIEAKLDKLVKLCSGMIEAGRAYVSANKLFVNG
IKDLSQQCKKEEMISECLEKCGESLQEIVNYHMILFDQAQRSIKQQLHTFIKEDVRKFKD
TKKQFDRVREDMELAQVKNAQAPRNKVHEAEEATQALILSRKAFRHLALDYVLQINVLQA
KKKFEILDAMLSFMRAQYTLFQQGFNILDEIDPYMKKLAAQLDQLVIDSAMEKREMEHKH
ALIQQRTLMQDFSYDDPKLEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKKLKDSLTVVVEDLRLCSVKPCEDNERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQA
SIASAYKDISDNYYIERLDRTASPSTSSIDSASEPRERGERADRGVRGGGESLLQRVQSL
PGNELCCDCGQTAPCWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMC
ELGNTVINHIYEGSCEELGAKKPGPSSSRQEKEAWIKSKYVEKRFLKKMSGSESLVEGER
KSRPWTVKKCQRHNSSVRAPNKARRKYHRYEPGSASPANLSAAAAAKFRRDSLFCPDELD
SLFSYFDTGSGPRSLSSDSGLGGSTDGSTDILVFGSVVDSVTEEEEESEESSSGEVEIEQ
EMSSDPEDQRELHPGALLHRSSRLHNLPLMAEALAHGADVHAASEEEEGKTPLIQAVIGG
SLIACEFLLQNGADVNQRDMRGRGPLHHATYLGRTGQVCLFLKRGASQTEVDEQGHDPLS
IAVQAANADIVTLLRLARMNEEMREAEAPLGQPGQYPSSSPTEQQYRKCIQEFICLTIDE
C
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtataaaagattcaccccgattcagggctggcattgac
gatgtggagacagatgtggtggagatcgaggcgaagctcgacaagctggtgaagctgtgc
agcgggatgatcgaggctggcagggcctacgtcagcgccaacaagctcttcgtcaacggc
atcaaggacctgtcccagcagtgcaagaaagaggagatgatatcggaatgtcttgaaaag
tgtggggaaagccttcaggagatcgtcaactaccacatgattttgttcgaccaggctcag
aggtcgatcaagcagcagcttcacaccttcattaaagaggatgtgcgtaaattcaaagac
accaagaagcagtttgaccgggtgcgcgaggacatggagctggcccaggtgaagaacgcc
caggcgcccaggaacaaggtccatgaggcagaggaggccacgcaggccctcatcctcagt
cgcaaagccttcaggcacctggcactagactatgtgctacagattaatgttctacaggct
aagaagaagtttgaaattctggatgcaatgttgtccttcatgcgagctcagtacactctg
ttccaacaaggctttaacatcttagatgagattgacccctacatgaaaaaactggctgca
cagctggatcagctggtcatcgactcagccatggagaagcgagagatggagcacaagcat
gccctcatccagcagagaactctgatgcaggacttttcctatgatgaccccaagttggaa
ttcaatgtggatgcacccaatggtgtggtcatggagggctacctcttcaagagagccagc
aacgctttcaagacctggaacaggcggtggttttctatacaaaacagccagctggtctac
caaaagaaactcaaggattccttgacagtggtggtggaggatctgaggctgtgctcggtc
aaaccgtgtgaagacaatgagaggaggttctgctttgaggtggtttcacccaccaagagc
tgtatgctgcaggctgagtctgagaagctgcggcaagcttggatccaggcggtccaggca
agcattgcctctgcgtacaaagacatcagcgacaattactacattgagcgcttggaccgg
acggcctcgccctccaccagcagcatcgactctgccagcgagcccagagagagaggggag
agggctgataggggagtgaggggagggggcgagagcctcctccagagggtacagagcctg
ccaggcaacgagctgtgctgcgactgcggccagacagctccgtgctgggcctccatcaac
ctgggagtgctgctctgcatcgagtgctcggggatccacaggagtttaggcgtccattgc
tctaaagtgcgttcactgacgttagactcgtgggagccggagttactcaagctgatgtgt
gaactgggaaacactgtgattaaccacatttatgagggaagctgtgaggaactaggagca
aaaaaacctggaccgtccagttcaaggcaagagaaagaagcttggatcaagtccaagtat
gtggagaaacgctttctgaagaaaatgagtggcagtgagtcactggtggagggcgaaagg
aagtcccgaccctggacagtgaagaagtgccagcgacacaacagctctgttcgggccccc
aacaaggcccgaaggaaataccaccgctacgagccaggcagcgcctcgcctgcaaacctc
tcagcagcagcggcagcaaagtttcgccgggactccctattctgtccagatgagctggac
tcactattttcctacttcgacaccggctctggtcctcgcagtcttagcagcgacagcggc
ctgggaggaagtacagacggcagcactgacatcctggtttttggctcggtggtggatagt
gtcacagaagaagaggaggagtctgaggagtcatccagcggtgaggtggagatcgagcag
gagatgtcctcggaccccgaggatcagagggaactgcaccccggggcgctcctccaccgg
tcctcgcgcctgcacaacctgccgctcatggccgaggcgctggcacacggcgctgacgtg
catgcggcaagtgaggaggaggaggggaaaacgccactcatacaggccgtgatcgggggc
tctctgatagcttgtgagttcctgctacagaacggagccgacgtgaaccagagggacatg
aggggcagaggccccctgcaccatgccacctatctggggcgaactggtcaggtgtgtctg
tttctgaagagaggagcatcacagacggaggtggatgagcagggtcacgaccccttaagt
attgctgtccaggccgccaatgcagacatcgtcaccctattgcgtctggcgcggatgaac
gaggagatgcgagaggctgaggctccgcttggtcaaccaggtcaataccccagcagcagc
cccactgagcagcagtataggaagtgcatccaggaattcatctgcctcaccatagacgaa
tgctag
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