Lates calcarifer (barramundi perch): 108884059
Help
Entry
108884059 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03013
Nucleocytoplasmic transport
lcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108884059
03015 mRNA surveillance pathway
108884059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108884059
Enzymes [BR:
lcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108884059
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108884059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
108884059
NCBI-ProteinID:
XP_018533223
UniProt:
A0AAJ7PN44
LinkDB
All DBs
Position
LG12:complement(18931767..18938908)
Genome browser
AA seq
497 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGNLQIKEKPECKWXYXFFNFAGTAANATDSSSAAAKSEAE
GDNKAADDDDKEDKAAQSLLNKLIRNNLVNNTNQVEVLQKDPNSPLYSVKSFEELRLKPQ
LLQGVYGMGFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRY
PQCLCVSPTYELALQTGKVIEQMGKHYPEVKLVYAIRGNKLQRGVKLQEQIVIGTPGTML
DWCSKFKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVW
NFAQRIVPDPNIIKLKREEETLDTIKQYYVLCNCKEEKFQALCNIYGAITIAQAMIFCHT
RKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQV
SVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKR
IEKLDTDDLDEIEKIAC
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctacagactcttgggcccaggcggtggacgaacaagaagccgcagcggaatcgatc
ggtaaccttcaaataaaagagaaaccagaatgcaaatggtaatattaattttttaacttt
gcaggcaccgctgcaaacgcaacagactccagcagtgcagctgcaaagtcagaagctgaa
ggagacaacaaggcagcagatgacgacgacaaagaggacaaagcggcacagtcattgttg
aacaagttgattcggaataatcttgtcaataatactaaccaagtggaagtccttcagaag
gatcccaactctccactctactctgtcaagtcctttgaggagttgcgactcaaacctcag
ctgcttcagggcgtgtacggcatgggtttcaaccggccgtctaaaatccaggagactgcc
ttacctatgatgctggctgaacctccacagaatctgattgcccagtcgcagtcaggaaca
gggaaaacagctgcctttgtcttggccatgctcagccacgtagaccccaacaacagatat
ccccagtgcctgtgtgtgtcacccacctatgagctggcacttcagactggtaaggtgatc
gagcagatgggcaagcactatcctgaggtcaaattagtctacgccatcagaggaaataaa
ttgcagcggggtgtgaagctgcaggaacagatagttattggcacacctggtaccatgctg
gactggtgcagtaagttcaagttcatagaccccaagaagatcaaggtgtttgtgctggat
gaggctgacgtcatgatcgccacacagggtcaccaggaccagagcatccgcatccagagg
atgctgcctaaaaactgccaaatgttgctgttctcagccacgtttgaagagacagtttgg
aacttcgcccagcgcatcgtgcctgaccccaacatcatcaagctgaagagagaggaggag
acgctggatactatcaaacagtactatgtattgtgcaactgcaaggaggagaagttccaa
gccctctgtaatatctacggagccatcaccatcgcccaggccatgatcttctgccataca
aggaagactgcaggctggctggcaggggagctgtccagagaaggccaccaggtggcgctg
ctcagtggagagatgcaggtggagcagagagctgctgtcatcgaacgcttcagagatggc
aaggagaaggtcctggtcaccacaaatgtttgtgctcgaggcattgatgttgagcaggtc
tctgtggtgatcaactttgacttgccagtggacaaggacggtaaccctgacaacgagaca
tacttgcacaggattggccgcacaggtcgatttggcaaaaggggactggccattaacatg
gtagacagcaagatgagcatgaacatcctcaacaggatccaggagcatttcaataaaagg
attgaaaaactagatacagatgatctggacgaaattgagaaaatcgcctgctaa
DBGET
integrated database retrieval system
