Lates calcarifer (barramundi perch): 108884061
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Entry
108884061 CDS
T04895
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108884061
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
108884061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
108884061
NCBI-ProteinID:
XP_018533244
UniProt:
A0AAJ7PN20
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Position
LG16_LG22:complement(8052474..8065887)
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AA seq
681 aa
AA seq
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MKCLLIASESAEVLFHWTDPEFQQNIQEQYGASQEEGQGLPAFEDSISTLFAPIIISCST
MVDRLGDSYTSFTTENNHIYILHQFDECLYIAVNGDGEEGEDDLRRKIYVMKKMIEVLFG
MVTLSGKLLRKELRPQDTEQRARLWKHLQSLLETYSHLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSVERAGEEVLHAFILVHTKLLAFYSSRNASTLATSDLLALIIMA
QNMYPSNVDLDDPGPEDVESTSGSGPESFYTPEPSPTDRDSNGSDKPVRGSTPVFEFMDP
DIQMAEDSLQTLEVPPPDPSTPRRVFLEVSSKDGIYPMMPHSMYCLPLWPGITLVLLTKI
PTNAVATSVYKFLEAFAKLERRLSEGQEGSAATRGQLTIHDIRGKLDKFIKALGPSELQS
AQLQNVWTEFKNRAFARGGSGFNRDLIPWCKNMKTQLCGIYRQCFLIEAGPADIPQRLSP
GLQERAQTMVQEKLMDWKDFLLVKSKRNITMVSYLEDFPGLIHFICVDRSTGQMIAPSLN
ITERTTSELGKGPLAQFIKSKVWSLVRTTRCFLQKGYSTVTLRDGDFYFCYFLWFENETG
YKLEAGDIPILPDDSAPIGMLAWDYYSRKLLRYYSKNHQGEVVKCYELLTVHLGVIPTEI
ILQHCRQLASKLWEPSRNPLL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttgctgatagccagcgagagcgccgaggtcctcttccactggactgacccg
gaattccagcagaatatccaggagcaatatggggcatctcaggaggagggccaggggctt
ccagccttcgaggacagcatcagcactctgttcgctcccatcattatctcctgcagcacc
atggtggacaggctgggtgacagctacacctccttcaccacagaaaacaaccatatctac
atcctacaccagttcgacgagtgtctctacattgctgtgaatggagatggcgaggaggga
gaggatgacctgaggaggaagatctatgtgatgaagaagatgattgaagtcctgtttggc
atggtgaccctcagcggtaaactcctcagaaaagaactgcgccctcaggacacagagcaa
agagcgaggctgtggaagcatctccagagcctgctggagacctacagccacctccgagag
aatgaccagagcttcttagtggaggcagtggagaggctgatccaccccacgctgtgtgag
cagtgcatcgagttccttgagcgccgtttagttcagcagctcaacagcagtgtagagaga
gcaggggaggaggtgctgcatgcattcatcctggttcacaccaaattgctcgccttctac
tccagccgcaatgcaagcacacttgccacctcagacctgctggccctcatcatcatggca
cagaatatgtatcctagcaacgtagacctggatgacccaggtcctgaggatgttgagagt
acgtcaggttcaggtcctgaaagtttctacaccccagaaccgtcccctacagacagagac
tcaaatggttcagacaagccagtgagaggaagtacccctgtgtttgagtttatggaccca
gacatccagatggcagaagacagcttacagactctggaagttcctccacctgacccttca
acccctcgcagggtcttcttagaggtctcaagcaaagatgggatatatcccatgatgcct
cactctatgtactgcctgccactgtggcctggaatcacactagtgctgctaactaagatt
cccaccaatgcagtagccacatcagtgtataagtttttggaagcatttgccaagctggag
aggcgtttaagtgaaggccaagaaggctctgctgccaccagaggccagctgactatacac
gacatccgtggcaaactggataaattcattaaagccctggggcccagtgagttacagtct
gcacagctgcaaaatgtctggacagagttcaagaaccgagccttcgccagaggaggatct
gggttcaacagagatcttatcccatggtgtaagaatatgaagacccagctgtgtggcata
taccgacagtgttttcttattgaagctggaccggctgacattcctcagcgtctctcccca
ggtctgcaggaacgagcccagaccatggtgcaagagaaactgatggactggaaggacttc
ctgttggtgaaaagcaagaggaatatcaccatggtgtcttacctggaggatttcccaggc
ctcattcattttatctgcgtggaccgatccaccggtcaaatgattgcgccgtctctcaac
atcacagaacgcaccacatctgagctggggaagggaccactggctcagttcatcaaaagc
aaggtgtggagcctggtcagaacaacacgctgctttctccagaagggctactccactgtc
acattacgtgatggagatttctacttctgctacttcctgtggtttgaaaatgaaacgggc
tacaagttagaggcaggggacatacccatcctacctgatgactctgcccccatcgggatg
cttgcctgggactactacagcaggaagctgctgcggtactacagtaagaatcaccagggt
gaggtggtgaagtgctacgagctgctgacagttcacctgggggtcatccccaccgagatc
atcctccagcactgcagacagctggcaagcaaactgtgggagccttcgcgcaatccgctg
ctgtag
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