Lates calcarifer (barramundi perch): 108884093
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Entry
108884093 CDS
T04895
Symbol
vsig8a
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8a
KO
K06788
coxsackievirus and adenovirus receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03267
Virion - Adenovirus
lcf04514
Cell adhesion molecule (CAM) interaction
lcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
108884093 (vsig8a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108884093 (vsig8a)
04517 IgSF CAM signaling
108884093 (vsig8a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108884093 (vsig8a)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
CTX family
108884093 (vsig8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
I-set
Ig_2
Ig_C17orf99
Ig_PDGFR_d4
DUF4381
Syndecan
Motif
Other DBs
NCBI-GeneID:
108884093
NCBI-ProteinID:
XP_018533264
LinkDB
All DBs
Position
LG9:4391614..4401533
Genome browser
AA seq
325 aa
AA seq
DB search
MFRQSCSHWRSTLSLSCLPWISGFLLCTATLLSTEFRYTQGMQVTSTGPRTIQKAEGESV
TLGCSYTASPLDTGELDIEWSVISPDTTQKDQMLMTYTSGTKYVYGNHPLANGLRFAAPD
PSKGDASLSIAVLSRAHSATYQCKVKKAPGVDMHKVSLVVMVKPSVPKCWVEGGELVGEA
VALHCHSARGSTPLTYTWRRESAGSIPAIATQDSVTGELKISNHSQSYAGIYLCEVNNVV
GAEHCRINLKANKPPNRAAVIVGTIVGSLLLILILLVLIGLLYWKLSNRHHYEKEFSNEI
RYCTAPQLQQRQQSRFKGVGSLMVR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttcagacaaagctgcagtcactggaggtcaacgctctccctcagctgtctgccctgg
atctcgggcttcttgttgtgcactgctacactcttgagcacagaattcagatatacacaa
gggatgcaggtgacatccacgggcccgcgaaccatccagaaggcagagggagagagtgtg
actttgggctgcagctacacagcaagcccccttgacactggagaactcgacattgaatgg
tctgtgatcagtccagacaccacacagaaagatcagatgctaatgacctataccagtggc
actaaatacgtctatggtaaccaccctcttgcaaatgggctcaggtttgctgcccctgac
ccctcaaagggtgacgcttccctctcaatcgctgtgctgtcacgtgctcatagtgctacc
tatcagtgtaaagtgaagaaagcacctggagtggacatgcacaaggtgtcgctggtcgta
atggtgaagccgtctgtgcctaagtgctgggtggagggaggggaactggttggtgaggct
gtggctctgcactgccactctgcaaggggctccactcccttaacatacacgtggaggagg
gaaagcgcaggctccatccctgccatagccacacaggacagcgtgaccggggagctgaaa
attagcaaccactcgcagagctacgcaggaatctacctttgtgaggtgaacaacgttgtt
ggagctgaacactgcaggatcaacctgaaagccaacaaacctccaaacagagcagcggtg
atagttggcaccattgtgggctctctgctccttatcctcatcctgctggtcctcattggg
cttctttactggaagctaagcaacagacatcactatgagaaggagttctccaatgagatc
aggtactgcacagcaccacagctccagcagagacagcagagcagatttaaaggtgttggc
agcttgatggttagataa
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integrated database retrieval system
