Lates calcarifer (barramundi perch): 108884099
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Entry
108884099 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein turtle homolog A
KO
K22655
immunoglobulin superfamily member 9
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108884099
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
IGSF9
108884099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
Ig_4
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
Ig_5
V-set_CD47
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
108884099
NCBI-ProteinID:
XP_050928747
UniProt:
A0AAJ8BA51
LinkDB
All DBs
Position
LG9:4162369..4212850
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AA seq
1050 aa
AA seq
DB search
MGPARSYLQTVTVVAALCLFLTPKGVRPEVRGKVGDVVELECSFPPSDPAAVSSASLHVV
EWVRQGLDIPVLIKFGSYVPRVHPQYEGRVSLVRITDLRLEGLQLDDQGLYECRILLLDK
PTDELRNGTWTLLSVTAPPTFTVAPPPAVDTLVGGDLSLACVANGNPTPSITWLKDGSVI
PKINYQEGALSLQAVSMQSAGQYTCHASNSEGNVTRVTKVKIKGPPVIVVPPKSISLNMS
QNALLRCQAVADPPNMTYVWQKGGENVHHIESLKTRVKIMVDGTLLISSLIPEDSGTYTC
IPTNGLLTPPTASANLTVMHPAQALQMPPETYLPTGMDGVVTCQVAAQPPLLRVDWTKDG
EPLDLFLYPGWTLTPEGSLHMATVNDDAAGVYMCTPYNSYGSMGPSGPTSVILQDPPSFS
ITPEKQYKQEAGRTLLIPCQGNKDSTIKVIWSKVDLARRISYSIEPNGSLLLQPLTKDHQ
GAWECSVANRVTSVRATTQVFVLGTSPHAATSLSVSPGVKQANISWEAGFDGGSAQTFSV
WVKKISASDNDGKQDWFSVTVPQSSGTRLQVTGLSPATKYQFSVLSHNKMGSGPFSEIVT
TWTLEPLLRRGKLKPPASLSANRGSAGVILQWSLPEAQHPPITGFVLQSCSEQGEWFNLV
EDISANSSETIVPGLHKDCVYELRLLSRSGELLSEPSPSVNVSTMGMEIYPGTSRLLEFV
PEPLLAGVLGGVGFMCLALVLLLGSACVISHRRDRRRRKKKDEPPSAIYKYSPSIKTSGT
GSPDSVLKKSLLPASTLYPTTSSTTTSSSSQTDCSSLSTENHHRRKHLLSNYSRGRLTRT
TSSPISPSIELISRGPDGRFTLPQFDNDTLSVHSRKSAKYDRPARVRRSVSLHSGGEDRK
EPPFVLSVDLPSCRPVEASSTSQICGMAQPLPHQNPYILDQKASYGGFPDISSLCSNSSL
ATIPHQDRGLSPTFPVLPHIRSSLGQPSTTASTLVLQMEHERERGNLSRCLKLAQEREEL
ERELQKYTLERGSMREMKREQPDLGEKRGW
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggggccagcgagatcatatttgcagactgtcactgtggtggcagctctttgcctgttt
ttgacccctaaaggtgtgaggccggaggtgcgtggaaaggttggagatgtggtggagctg
gagtgtagttttcctccatcagacccagccgctgtgtcctctgcatctctacatgtggta
gaatgggttcgacagggacttgacatccctgtcttgatcaaatttggatcgtatgtgcct
cgggtccatccacaatacgaggggcgggtgtctctggtacgaatcactgacctgaggctg
gagggtctgcaactggatgatcagggcttgtacgagtgtcgaatcctcttactggataaa
ccaacagatgagctgcgaaatggcacctggactctgctctctgtaactgctccacccacc
ttcaccgtagcccctcctcctgcagtggatactctggttggaggtgacctctctcttgcc
tgtgttgccaatggcaaccctactccatccatcacctggctaaaggatggcagtgtaatt
ccaaaaataaattatcaggaaggagccttatctctgcaagcagtgagcatgcagtcagca
ggacagtacacctgccacgcctccaactccgagggaaacgtgactcgcgtgacgaaagtg
aagatcaaaggtccgcctgtcattgtcgtccctcccaaaagcatctctctcaatatgtcc
cagaatgcacttctgcggtgccaggcggtggctgacccccccaacatgacctatgtgtgg
cagaaaggtggagaaaacgttcatcacatagagtctttgaaaacgcgagtgaagattatg
gtagatggaactctgctcatttccagtctcatcccagaggattctgggacctacacctgc
ataccgaccaatggcctgttgaccccgcccactgcctctgccaacctcacagtgatgcat
ccagcccaggctcttcaaatgcctccagaaacgtaccttcccacaggtatggatggtgtg
gttacctgccaagtggcagctcaacctccactgctccgtgttgactggacgaaggatgga
gaaccacttgacctgttcttgtatccaggatggaccttgacaccagagggctctttgcac
atggccacagtcaatgatgatgcagcaggcgtgtacatgtgcaccccctacaacagctat
ggcagcatgggtccatctgggccaaccagtgtaattctacaggaccccccatcgttcagc
atcactccagagaagcagtacaaacaggaggctggaaggacccttctcatcccctgtcaa
ggaaataaggattcaacaattaaagtgatctggagcaaggtcgacctggctcgtcgcatc
tcgtactccatagaacccaatggttctctgctgctgcagcctctcaccaaggaccaccag
ggggcatgggagtgcagcgttgccaatcgcgtaacctcggtgagggccaccacgcaagtc
tttgtcctgggaaccagtccccatgctgctacttctctgtccgtctctccaggggtgaag
caggccaacatatcctgggaggcaggctttgatggaggatcagcacagacattttcagtt
tgggtgaagaagatttcagcgagtgataatgatgggaagcaggactggttctctgtgact
gtgccccagtcctctggcaccaggctgcaggtgacaggcctttctcctgccaccaaatac
cagttcagcgtcctgtctcacaataagatgggctcaggacccttcagcgagatcgtcacc
acctggaccttggagcctctactgaggagaggtaaactaaagcctcctgcgtcgctgtca
gcaaatcgtggctcagcaggagttattctgcaatggtcccttcctgaagctcagcaccct
cccatcacaggctttgttctccagtcctgctccgagcaaggggagtggtttaatttggtc
gaggacatcagtgccaacagtagcgagaccatcgttccgggtctgcacaaggattgtgtg
tacgagctacggctgctatctcgtagcggggagttgctgagcgagcccagtccatcagtc
aatgtctccaccatggggatggagatctaccccggcacatcccgactcctggagttcgtc
ccggagccattactggctggcgtgctgggcggggtcggtttcatgtgcttggcactggtc
ttgctgctggggtccgcctgtgtcatcagccacaggagggaccggcgccgcagaaagaag
aaggatgagcccccttcagccatctataaatactccccatcaataaagacttcaggcacc
ggcagtccagacagtgtgttgaagaaaagcctacttccagccagcaccctctatcccacc
acttcttctaccaccacctcctcctcctcgcagacagactgttcctcccttagcactgag
aatcatcatcgacggaagcatctcctgtccaactacagcaggggccgccttactaggaca
acttcttctccgatttctccctcaattgagttgatctccagaggtccagatgggcgcttc
acacttccacagtttgacaatgacacgttgagtgttcacagcaggaaaagtgcaaagtat
gaccgacctgccagagtccgaaggtctgtgtcactgcactcaggtggggaggacaggaaa
gagccgccttttgtgctctctgttgatctcccatcttgcagaccagtggaggccagttcc
acaagccaaatctgtggcatggcccagcccctgccccatcaaaatccttatattttggat
cagaaggcaagctatggtggctttcccgacattagcagcctgtgctcaaacagcagtttg
gccacaattcctcatcaagacagaggattatctcccacatttccagtgctcccacatatt
cgatccagtctaggtcagccgtctacaactgccagcaccctggtgctccaaatggagcat
gagcgggagagagggaacctgagtcgctgcctgaaactggctcaggagagggaggagctc
gagagggagctccagaagtacacactggaaagaggctctatgagggaaatgaagagagag
cagccagacttaggagagaagagaggctggtga
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