Lates calcarifer (barramundi perch): 108884118
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Entry
108884118 CDS
T04895
Name
(RefSeq) rho GTPase-activating protein 40 isoform X1
KO
K20639
Rho GTPase-activating protein 18/28/40
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108884118
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108884118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
108884118
NCBI-ProteinID:
XP_018533295
UniProt:
A0AAJ7LXU5
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Position
LG9:complement(4579994..4600316)
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AA seq
689 aa
AA seq
DB search
MGGREEVVVTRLGSDMQSPRTRLNRFRFRPAQSPLRGKHVKPSSLKKKARDPSPTEMSVE
PWASPQDQAAAEHAQHSTHALPAPDQEQHPDKLCLDSFWSEVETIRQGSGYADLDSTRRD
SRQSEEGEQEEQWLADAGLSTLISEDSGDVDNVVLLSTLTRTQAEAVQRRLDSYTLSLRK
RNKPAPRDVRDIFNSPIAQTRLPEAQHSEDLAQNSMASVTKTPLSAVTPEHQRCAPKEEF
FITDVAYCEQAVIFLKQAKLPQLNMQRRKEDGTLPRVVCPKCRLGVTRIQDLSHADMKKV
RQLALIDMTALCDLLELEVKRHKTSKRKIPESSLFGVQLATLLENDQKVKPNTTTPLFLQ
ALLSFLEKKGVDSEGILRVPGSQSRIKLLQQNLEANFYSGQVSWDDVSPNDAAALLKKFI
RELPAPLLTAEYLNTFSAVRDITELKQKLHMLNLLILLLPEPNRNTLKALLEFLSKVVSR
EKRNRMNLWAVATIMAPNLFLHKAVPSRLTEGSEKGQAEKAADVMRLLIRYQDLLWTIPN
FLMSQVRKLNENSNRRYQFYDRRIKNLLRKIHTDSREKPDKNTSELCRTVKVQVGDLVSG
TMEYQLNINSRASDLLAQFHRQFLRSPENGKGKMRRNGSVANPDCALYEVGGNIGEHCLD
PDTHLLDLYNNNPGGEWLIKLRPNASRGL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcagagaggaggtagtggtgaccaggctcgggtccgacatgcagtctccacgc
accaggttgaaccgtttcaggttccgtccggcccaaagcccactgagggggaagcacgtg
aagccgtcctccctcaagaaaaaagccagagatcccagccccaccgagatgagcgtggag
ccctgggccagcccgcaggaccaggcagccgctgaacacgcacaacacagcacgcacgcg
cttcccgccccggatcaggagcagcaccccgacaaactctgcctggactccttctggagt
gaggtggagaccatccgacaggggagtggctacgcagacctcgacagcacgaggagagac
tccagacagtcagaagagggcgaacaggaggagcagtggttggctgacgctggtttgtcg
accctcatcagtgaggacagcggagatgtagacaacgtggtgctgctgtccactctgacc
cggacccaggccgaagccgtgcagcgccgactggattcctacacactgtccctccgcaag
aggaacaaaccggcgccacgcgacgttcgagacatcttcaactcccccatcgctcagacc
cgcctgcctgaggcgcagcacagtgaagacctcgcacaaaacagcatggcgtcagttact
aaaacaccactgtcagccgtgacaccggagcatcagcgatgtgctcctaaagaggagttc
ttcatcaccgacgtggcttactgcgaacaggccgtcatcttcctcaaacaggccaaactg
ccgcagctcaacatgcagcgcaggaaggaggacggcacgctgccccgggtggtctgcccc
aagtgccgtctaggagtgactcgcatccaagatctctcccacgccgacatgaagaaggtg
cggcagctggccctcatcgacatgacggcgctgtgcgacctcctggagctcgaggtcaaa
aggcacaagaccagcaagaggaaaatcccagagagctcgctgttcggggtgcagctggcc
acgctgctggagaacgatcagaaagtgaagcccaacaccacgactcctctcttcctgcag
gcgttgttgtcgtttttggagaagaaaggagtcgactcagaggggatcctgcgggttcca
gggtctcagtccagaatcaagctgctgcagcagaacttggaggccaacttctactcagga
caggtcagctgggatgacgtgagtccaaacgacgctgccgcgctgctgaagaagttcatc
cgggaacttcccgcccctctgctcaccgccgagtacctcaacaccttcagcgccgtcaga
gacatcacagagctgaagcagaaactccacatgttgaacctgctcatcctgctgctgcct
gagcccaacaggaacacactgaaggctctcctcgagttcctcagtaaggtggtttccagg
gagaagaggaacaggatgaacctgtgggccgtggcgaccatcatggctcccaacctcttc
ctccataaggccgtccccagcagactgacggagggctcagagaaaggacaggcggagaag
gcggctgatgttatgaggctcctcatccgctaccaggacctgctgtggacgatcccaaat
ttcctcatgagccaggtgcggaagctgaatgagaacagtaaccggcgttaccagttctac
gatcgccgcatcaagaacctgctgaggaagatccacacagacagccgcgagaaacctgat
aaaaacacctcggagctgtgccgtacggtgaaggtccaggtcggggatctggtgagcggc
accatggagtaccagctcaacatcaactcacgagcctcagacctgctcgcccagtttcac
cgccagttcctccgcagccccgaaaatggaaaaggcaaaatgagaagaaacggctctgtg
gcgaatccagactgcgccctgtacgaagtgggagggaatatcggtgaacactgtctggat
cctgacacacaccttctggacctgtacaacaacaaccctggaggagagtggctcatcaag
ctgagacctaacgccagcagagggctgtga
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