Lates calcarifer (barramundi perch): 108884127
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Entry
108884127 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: acid-sensing ion channel 1B
KO
K04829
acid-sensing ion channel 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108884127
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
108884127
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GFIT
Motif
Pfam:
ASC
DUF6297
Motif
Other DBs
NCBI-GeneID:
108884127
NCBI-ProteinID:
XP_018533307
UniProt:
A0AAJ7LWT0
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Position
LG12:27648187..27781513
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AA seq
522 aa
AA seq
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MDLKADSEDMDYKRPAPIEVFASRSTLHGISHMFTYERMCIKRSLWILFFLGSLGVLVMV
GVDRVQFYFQYPHVTKLDEVAAPMMVFPSVTFCNLNSFRFSRVTRNDLYHAGELLALLNG
RYEIRDPHLVEENVLQILKERADFDNYKPRPFNMREFYDRTGHDIKDMLLSCYYRGMECS
AEDFKVIFTRYGKCYTFNSGQDGRPLMVTMKGGMGNGLELMLDIQQDEYLPVWGETDETS
FEAGIKVQIHTQDEPPFIDQLGFGVAPGFQTFVSCQEQRLTYLPPPWGDCKATPMDSDFF
STYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVERDNDYCV
CETPCNMTRYGKEMSFVKIPSKASAKYLAKKFNKTEQYIADNILVLDIYFEALNYETIEQ
KKAYELAGLLGDIGGQMGLFIGASILTILELFDYLYEVIKFKLCRCAKKKHKGRNNNDRG
AVLSLDDVKRHAPCENLRTPSTYPGNMLPHHPGQGNFEDFTC
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaaagcggactcggaggacatggactacaagcggccggctcctatcgaagtt
ttcgccagcaggtccacgctgcacggcatctcgcacatgttcacttatgagcggatgtgt
atcaagcgcagtctgtggatcctgttcttcctgggctccctgggcgtgctggtgatggtg
ggcgtggaccgggtgcagttctacttccagtaccctcatgtcaccaagctagacgaggta
gcagctccgatgatggtgttcccctcggtcaccttctgcaacctcaactcgttccgcttc
agccgagtgacccgcaacgacctgtaccacgctggggagctccttgccttgctcaacggc
aggtatgagatccgggacccacacctggtggaggaaaatgtcctgcagatcctgaaggag
agggctgactttgacaactataagccccgccccttcaacatgcgtgaattctacgaccga
acgggacacgacatcaaggacatgctgctttcctgctactaccgtggcatggagtgcagc
gccgaggacttcaaagtgatattcacacgctatggaaaatgctacacctttaattcaggc
caagatggacgacccctgatggtgacgatgaagggagggatgggcaatggcctggagctg
atgctagatatccagcaggatgaatacttgcctgtatggggagagacggatgagacgtcg
tttgaagcagggatcaaagttcagatccacacccaggacgagccaccgttcatagaccag
ctgggcttcggagtggcacccgggtttcagacctttgtatcctgtcaggagcaacggctg
acgtacctgcccccgccgtggggcgactgcaaggccacgccgatggactccgacttcttc
agcacctacagcatcacggcctgccggatcgactgtgagacacgctatctggtggagaac
tgtaactgcaggatggtccacatgcctggagatgccccatactgcaccccggagcagtac
aaagagtgtgcagatcctgccttggactttcttgtggagagggataatgactactgtgtg
tgtgagacaccctgcaacatgacgcgctacggtaaagagatgtcctttgtcaagattccc
agcaaagcatcagcaaagtatctcgccaagaaattcaacaagacagagcagtacatagct
gataacattctcgtgctggacatctactttgaggcactcaactatgaaaccattgaacaa
aagaaagcctatgaactggcaggccttctgggtgatatcggaggtcagatgggtcttttc
atcggagccagcatcctcaccattctcgaactctttgactatctatatgaggtgatcaag
ttcaagctgtgccgatgcgcaaagaagaaacacaaaggccgcaacaacaatgaccgggga
gctgtgctgagcctggatgatgtgaaacgccatgctccttgtgagaacctgcgtacacca
tcaacatatcctggcaacatgctacctcatcacccgggccagggcaactttgaagacttc
acctgctga
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