Lates calcarifer (barramundi perch): 108884147
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Entry
108884147 CDS
T04895
Symbol
e2f5
Name
(RefSeq) transcription factor E2F5
KO
K04682
transcription factor E2F4/5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04110
Cell cycle
lcf04218
Cellular senescence
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108884147 (e2f5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108884147 (e2f5)
04218 Cellular senescence
108884147 (e2f5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108884147 (e2f5)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
108884147 (e2f5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
DivIC
ZapB
Mis12
TMF_DNA_bd
FlxA
DUF3450
Seryl_tRNA_N
DUF4140
APG6_N
TSC22
Motif
Other DBs
NCBI-GeneID:
108884147
NCBI-ProteinID:
XP_050925884
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All DBs
Position
LG4:8044305..8053015
Genome browser
AA seq
359 aa
AA seq
DB search
MEFETTETVRSTPSRHEKSLGLLTMKFVSLLQEAKDGVLDLKVAADSLAVKQKRRIYDIT
NVLEGVGLIEKKNKNIIQWRGENTGSQTQEVLEQVKVLKAQISELEAQEKELDNQKAWLE
ENIKQLNHDPITNTYKFVTHEDICSAFSGDTLLAVVAPAGTQLEVPLPEMGLSGQKKYQV
NLRSHTAPIQVMLINRDSESTIPVVFPVPPTDDICPMPTPPTTPASLQRFPLSTSAYSIS
NTTSYCSQDSLCSDHQMVLPEHDEVLTPSSTPPDVQMECQPVAVLEQQQMDLAGPEFQSV
LDVSSLLKLSAAGDHMKDDREGAVDLIDELMSTDGIDYSFNLDDNEGVCDLFDVQILNY
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgagacgacggagaccgtacgctcgacaccaagtcgacacgaaaaaagtttg
gggctcctcacaatgaagtttgtcagtctgctacaagaagctaaggatggcgtccttgat
ctgaaagtggctgcagacagcttggcagtgaagcagaagaggaggatatacgacatcact
aatgtgctggaaggtgtggggctgattgagaagaaaaacaagaatatcatccagtggagg
ggtgagaacacaggtagccaaactcaagaggtgctggagcaggtaaaagtgttgaaggca
cagatctctgagctggaggcccaggagaaagagctggacaaccaaaaggcctggctggag
gagaacatcaaacagcttaaccatgatcctatcaccaacacttataaatttgtgacacat
gaagacatctgcagtgctttcagcggagacactcttcttgctgttgtggctcctgccggg
acacagctagaggttccactacctgaaatgggcctgagtggtcagaagaagtaccaggtt
aacctacgcagccacacagctcccatccaggtcatgctcatcaacagagattcagaatcc
acaatacccgtggtcttccctgtgccacccaccgacgacatctgtccgatgccaactcca
cccaccacccccgccagcctacagaggttccccctttcaacgtcagcgtactccatctcc
aataccacctcctattgcagccaggactccctctgctcagaccaccagatggtgctgcca
gaacatgatgaagtgctgacgccgtcgtccacccctcctgatgtgcagatggagtgtcag
ccagtggcagtgttggagcagcagcagatggacctggcaggcccagaattccagtctgtc
ctggacgtgagcagcctgctgaagctcagtgctgctggggaccacatgaaggatgacaga
gagggagctgttgacctgattgatgagctaatgtccactgatggtatagattacagcttc
aacctggatgacaatgagggagtgtgtgacctgtttgacgtgcagatcctcaattactga
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