Lates calcarifer (barramundi perch): 108884166
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Entry
108884166 CDS
T04895
Symbol
arhgef18a
Name
(RefSeq) rho guanine nucleotide exchange factor 18a
KO
K21066
A-kinase anchor protein 18
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108884166 (arhgef18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108884166 (arhgef18a)
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108884166 (arhgef18a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
Motif
Other DBs
NCBI-GeneID:
108884166
NCBI-ProteinID:
XP_018533363
UniProt:
A0AAJ7PN73
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Position
LG4:7769313..7785889
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AA seq
986 aa
AA seq
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MTVTPKKSSPRLASSSCNDTSPRSGPAQMDDVDALRLKLFPEDSVSPASSLAEPINLEDS
HYARLQGELEFDAQNLEAESWSMAVDQNYLKALSKEAVKRQDVIYELIQTEMHHVRTLKI
LLHVYMHELRQSQLIEEDRLERLFPGVEGLLSLHQHFLNCLKLRQTQSQEEGGPDSYQIT
QLGDILISQFSDSLGEGMMEYYSVFCSHHIEAIRLHKEQLQNKKLQILIRRLGQLPLVRR
LGIPECLLLVTQRITKYPILVERIIQNTEADTDEHKSLVQGLGRIKDTISQVNAQVCGYQ
KAARLREIAQRLESKSQGRLKEGHLFRREDLFKRNRTLLHEGGVTWKASGRQKDIHAVLL
SDVLLLLQEKDQKLVFAAVDNKPAVISLQRLIVREVAHDDKAMFLICACTTSLPEMYEIH
TGSKEECVTWTALIREAVESYPQEELQRELIAKLQECQDDLKEKDDQIIQCLTEKKKIFD
HLYKSATGQETPHKGLLLQADATELQGGTLLEGAIKEVENLLNLFALRMRDPNLLMEESQ
VQEGLHRQAETSGVGDSDSHVNTMKNGDVAEWSSSSEDIPVYISHTAEICYSEGLEQSAD
DDTLPEPDCSPASSHFPEAEVCERLMRIEQFLYSLKAIVAQQDSQIELQHAFQSSSQKSA
RHYSNMLLEQEKQRNLEKQKEELANLHKQQAQHQEEQQRWEKERDRQRIQLEALEAQLQQ
READCNRQEEKLNGEKAELECLRENYQQDLERLRESTKSVEKEREQLIQEKERLDKLKSK
YIPGHANYDDPTQCRNHSTYLSFRGSIVNGGGNPTLTPKPSILLPNSDPMEIPPKVPPRR
ESISPQLAKPELPVHLFSTTNQVHKPPAVQQQIPTKLATQPKGKEKGFKTKGSHHRTQSA
ASIDVNQVLPIRVTGKEGGSLRAKRNASPQRIYQSDTFKPPGSGHNVKTSQSFSTHKRSS
SEARPPAPPPFPKDVLETGKEKVIFL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaccccaaaaaaatccagccctcggcttgcttcctcttcttgcaacgacaca
agtcccagatccggtccagcacagatggatgacgtagatgccctgcggttgaaactcttc
cctgaggactctgtgtcgccagcttcctctttggccgagcccatcaacctagaagattcc
cactatgctcggctgcaaggtgagctcgagtttgatgctcagaacctggaggcagagtct
tggagcatggctgtggaccagaactacttgaaggccctgagcaaagaggctgttaaaaga
caggatgtcatctatgagttgatccagacagagatgcaccatgtccgcaccttaaaaatc
ctcctccatgtctatatgcacgagctgaggcagtctcagctgatcgaggaagacaggctg
gagcgactcttccccggagtggaaggcctcctcagcctccaccagcatttcctcaactgc
ctcaaattacgccagacccaaagtcaggaggaaggaggcccagacagctaccagataaca
cagctgggggacatcctcatctctcagttttcagattcactgggagaaggaatgatggag
tattacagtgttttctgcagccatcacattgaagccatcagactccacaaagagcagctg
cagaacaagaaactgcagattcttatcaggagattgggtcagctgcctcttgtgcgaagg
ttgggaatccctgaatgtcttctattagttactcaacgcatcacaaaatatcccatcctg
gtggagcgaatcatacagaacactgaagctgacacagatgagcacaagtctctggtgcag
ggtttggggcggatcaaagacaccatctcccaggtgaacgctcaggtctgtggataccag
aaagcagctcgtctgagagagattgcccagcgtctggagtcaaaatctcagggccggctg
aaggaagggcacctgttccgcagagaagatctgttcaagagaaacaggacgctgctgcat
gaaggcggggtcacatggaaggcctctggtagacagaaagacatccacgctgtgctgctg
tcagacgtgctcctcctcttacaagagaaagatcagaagcttgtatttgctgctgtggac
aacaaaccagcagtgatctccctccaaaggctgatagttagagaagtggcccacgatgac
aaagccatgttcctcatttgtgcttgcaccaccagcctaccagagatgtatgagatccac
actggctccaaagaagaatgcgtcacctggacggccctcatacgagaagctgtggaaagc
tatccacaagaggagctgcaacgggaactgattgccaagctacaggaatgtcaagatgac
ctgaaggagaaggatgaccagataattcagtgtctgacagagaagaagaagatctttgat
catctctacaagagtgcaacaggtcaggaaacaccacacaaagggctgctgctccaagcg
gacgccactgagctccagggagggacactgctcgaaggagccatcaaggaggtggaaaac
ctgctgaacctgtttgctttgaggatgagagacccaaaccttctaatggaggagagccag
gttcaggaggggctgcacaggcaggctgagacctctggagtgggtgacagtgactcccat
gtaaataccatgaaaaatggagatgtagctgagtggtccagtagcagcgaggacattcca
gtgtacatcagtcacaccgctgaaatatgctactctgagggcctggaacagtctgctgat
gatgacacactcccagagccagactgcagtccagcctctagtcatttccctgaggcagag
gtatgtgagaggttgatgaggattgaacagtttctctacagtttaaaggcaatcgtcgct
cagcaggacagccagattgagctgcagcatgcttttcagtcaagcagccaaaagtccgct
cgtcattacagcaacatgctgctcgagcaggagaagcagcgcaacttggagaagcagaag
gaggagctggccaacctgcacaagcagcaggctcagcatcaggaggagcagcaacggtgg
gagaaggagagggatcggcagaggatacagctcgaggctctggaggctcagctgcagcag
agggaggcagactgcaacaggcaggaggagaagcttaacggggagaaagctgagctggag
tgtctgcgggaaaactaccagcaggacctggagaggctgagggagtcgacaaaatcagtg
gagaaggaacgggagcaactgatccaggagaaggagcgactggacaagttaaagtcaaag
tacatcccaggacatgccaactatgatgatcccacacaatgtcggaatcactccacttac
ctgtcgttccgaggaagcattgtgaatggaggtggaaatccgaccttaactccaaagccc
agcatcttgctccccaactccgatcccatggaaattcctccaaaggttccaccacgcagg
gagagcatcagcccgcagctggccaaacctgaactgcctgtgcacctgttcagcaccacc
aaccaggtgcataaacctcctgccgtgcagcagcagatccccaccaagctggccactcag
cccaagggaaaggagaaaggcttcaagacaaaggggtcccaccacagaacacagagtgca
gcctctatagatgtgaatcaggtgctgcccatccgagtgacggggaaggaaggaggcagt
ctgagagccaagagaaacgccagtcctcaaagaatctaccagtcagacaccttcaaacca
ccaggatctggccacaatgtgaaaacgtctcagtccttcagcacacacaagaggagcagc
agtgaggctcgtccaccagcaccacctcctttccccaaagacgtcctcgaaacaggcaaa
gagaaggtgatattcctttaa
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