Lates calcarifer (barramundi perch): 108884220
Help
Entry
108884220 CDS
T04895
Name
(RefSeq) rho GTPase-activating protein 29 isoform X1
KO
K20644
Rho GTPase-activating protein 29
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108884220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108884220
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108884220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
Motif
Other DBs
NCBI-GeneID:
108884220
NCBI-ProteinID:
XP_018533496
UniProt:
A0A4W6FEH4
LinkDB
All DBs
Position
LG4:6578770..6608091
Genome browser
AA seq
1391 aa
AA seq
DB search
MLRKNSSSSGGSGTKHTQGLPRHLSKTHTASLSAGSAKTLDMGRNSKNSNPLSSMGLSSR
LVGAPGVDPEYVMQLVNDVRWFADVLLNLKDAFQYKDNLEGLQEVVQERLAELLRVLKAV
IGKHQTLNSVDILGAAGTVIAKVKGVNFKEVNPEYKKAIFGEIHSSIDTLAFTFGNVVSD
FLMGDVDSGSGLGIPQTRRSRSFDNLSVDPEEYVSEKSDLVGPEVSLSREEEVDLTLLKN
DSGVESALLYAKAWSKYIKDLLAWMEKRIAMDIEYAKSYAKMAESAKTLASQQDYMPFSE
IYVSTFKNDIEYNQLLIQTAMALQTNKFIQPLLARKNELDKLRKDIKEQWQREQKKMQEA
DATLRKARALKSQRREEYQKAHSSTNRSQEDQSNNSGNKQLEKKRRLEEEALQKAEEAQD
QYQSCMADAGVRRMDLANAKSTILTQIREMVFQCDLTLKAVTVNWFQMQQAQTVSFPAHY
QALSDSAKLYEPGECYAEFARNLPKNLPKERLHSDSISSDNTRFLFNKRSVGSTHSSHGN
LSQASITSCDVLSGDEVDNPLHRPAKISEQRSNSSTDIQALRSQIPLRAWASSSQGSQGG
MCSDSESAGGSSESRSMDSPTASPGDFKRRLPRTPSTGTMSSADDLDEREPPSPSDNGLA
EMVTETASSPGPFRNAQMSKAAQTHKLRKLRAPSKCRECDSLVVFHGAECEECSLACHKK
CLETLAIQCGHKKLQGRLHLFGIDFAQAAKNSPDGIPFIIKKCTSEIESRALNIKGIYRV
NGAKSRVEKLCQAFENGKDLVELSDLSPHDISNVLKLYLRQLPEPLILYRYYNDIIGLSK
ECQRVIVEENDKPQSTQTGEKAGPSVQLNRVIFKIRDLLRQLPSANYRTLRYLIAHLNKV
TEQAEENKMTASNLGIIFGPTLVKPRQTDAEVSLSSLVDYPYQALMVELLVRHFKAVFDA
SLLSGSDMAPTGQGSPRLTPQEKVQRLSRHSTSLMDIKESAKAYKRYSSVIPSSHILDEV
QEVQPGKDRTEVSALDRLNGIQTSSGAEVQRSTLVFGRPSTTVASTTNVAPKVQLRTQRT
RQASRPISMPLERLPAPAQLSERNNRNTAANVDVTSSERDTTAETIQEIPEPEKARQSGS
SRVSTYYITPFIDTQAMQRRTWDRKYKHYDVTPRTAMIVANLPPASSGVAPIKATVPLSH
NPTVTTASVALTTTSVSTIFSTSPYTASARPVWTTKRENDTNNSVSESSSSPNLPLTLRA
PRTLQPPPGTFYKPPTSINSRARTLPNWTTTVTTITTTTTTTSSSLAPITSSQVVTPSPA
PTSPPPTRLQTQDSTDSAIDPGVSTSASLSPPQSPPPSSPDDLSPSETKPVYQRLRPRRL
QELEHREAHFV
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgctacggaagaacagcagcagcagtggtggcagtgggacaaagcacacccagggtcta
ccacgacacctttccaaaacccacacagcatctctgtcagccggatctgccaagaccttg
gatatgggtcgcaactccaagaactccaaccctctgagcagcatggggctgtcctctcgg
ctggtgggggcaccaggagtggacccagagtatgtaatgcagctggtgaatgatgtgcgg
tggttcgctgatgtgctgctcaacctcaaggatgctttccagtataaagacaatctggaa
ggtcttcaggaggtggtgcaggagcgcttagcagagttactccgcgtcctcaaggctgtc
atcggcaaacaccagacactcaactcggtggacatcctaggagcggctggcacggtcatt
gccaaggtcaaaggcgttaacttcaaggaagtgaacccagaatacaaaaaagctatattt
ggcgagatacactcatccatcgacactttggctttcacatttggcaatgtagtttctgac
ttccttatgggagatgtggacagcggttcagggttggggatcccccagaccaggagaagc
aggtcttttgacaacctctctgtggatcctgaggaatatgtctcagagaaaagtgacctt
gtgggcccagaggtgtcattgtcacgggaggaagaagttgacttgaccctgctgaagaat
gacagtggagtggagtccgctctactctacgctaaggcctggtccaagtatatcaaagac
cttctggcctggatggagaaaagaattgccatggatattgagtatgctaaaagttatgcc
aaaatggctgagtctgctaagacactggccagtcaacaggactacatgccattcagcgaa
atctacgtttcaacattcaagaatgacattgaatacaaccagctgcttattcaaactgca
atggcccttcaaaccaataaattcatacagcctcttctggctcgcaagaatgaactggac
aagctgaggaaagacatcaaggagcagtggcagagggagcaaaagaaaatgcaagaggca
gatgcaaccttgcgtaaggcacgagcactcaagtcccagaggagagaagagtaccagaaa
gcacactcttctaccaaccgctcccaggaggaccagtctaataattccggtaacaaacag
ctggagaagaaaaggaggctcgaggaggaggccctgcagaaggcggaggaggcccaggac
cagtaccagagctgtatggctgacgcaggcgtcaggaggatggatctggccaacgctaag
agcaccatcctcacacagatccgagagatggtgttccagtgtgacctcacactcaaagct
gtgacagtgaattggtttcagatgcagcaggcacagactgtgtcattccctgcccactac
caggccctgagtgacagtgccaagttgtacgaaccgggtgaatgctatgctgagtttgcc
cgcaacctacccaaaaatctgcctaaagagcgtctgcactctgactccatctcatctgac
aataccaggtttctgttcaacaaaaggtcagtgggcagcactcactcctcccatggcaac
ctgtcgcaggcatctatcacctcctgtgacgtgctgagcggagatgaagtggacaatcca
ttacaccggccagcaaagatcagtgagcagaggtccaacagcagcacagacatacaagcg
ctaagaagccagatcccgctgagagcctgggcctccagcagtcagggaagccagggcggg
atgtgcagtgactcggagagtgctggaggcagcagcgaatcgaggtccatggactccccc
accgccagtcctggtgacttcaaacgacggctacccagaaccccctctactggaacgatg
tcctctgctgatgacttagatgagagggagccaccatcaccctcagacaatggtctggca
gagatggtgacagagacggccagttctcctggtcctttccgaaatgctcagatgtccaaa
gctgctcaaacccataagctaagaaaactgcgagctccgtctaagtgcagggagtgtgac
agtctggttgttttccatggagctgagtgtgaggagtgctccctggcctgccataagaag
tgcctagagacgcttgctatccagtgtggccataaaaagctgcaaggcagactacacctg
tttggtattgactttgcccaagcagcaaaaaacagcccagatggtatcccctttatcatc
aagaagtgcacatctgagattgagagtcgagccctcaacatcaaggggatttatcgtgtt
aatggtgccaaatcacgtgttgagaagctctgtcaggcatttgaaaatgggaaggacttg
gttgagctgtctgatctctcaccacacgacatcagcaacgtcctcaaactctacctgaga
cagttaccagagccattgatcctgtatcgatactacaacgacatcattggcttgtcaaaa
gagtgtcagagagtgatagtggaggagaatgataaacctcagagcacccagacaggagag
aaagccggtccgagtgtgcagctcaacagagtcatcttcaagatccgagatctgctgcgc
cagctgccctcagccaactacaggactctgcgctaccttatagcacacttgaacaaagtg
acagagcaggcagaagagaacaagatgactgcgagtaacctgggcattatctttggcccc
acactggtgaagccacggcagacagatgcagaggtgtccctgtcctccctggtggactac
ccctaccaggccctgatggtggagctgctcgtgcgacacttcaaagcggtctttgacgca
tcactcctgtctggctcggacatggcccccactggccaagggtctcccagactcacccct
caagagaaagtgcagaggctcagcagacactccacctccctgatggacatcaaagagagt
gccaaagcctacaaaagatattcatcagtgatcccatcctcacacatcctggacgaggtg
caggaggtccagccaggaaaagacagaacagaggtctcagccctggatagactcaatggg
atccagacatctagtggagcagaagtccagaggtcaaccctagtgtttggccgtcccagc
accaccgtggcctctaccaccaacgtggcaccaaaagtccagctacgcacccagcgcacc
agacaggcgtctcgaccgatcagcatgccgctggaacgtctgcctgcccccgctcagctc
agcgagaggaataatcgtaacactgctgctaatgttgacgtaacctcctctgagcgggat
accaccgctgaaactatacaggagataccagagccagaaaaggcacgccaaagtggctca
tccagagtaagcacctactacatcacgccattcattgacacacaggcgatgcagaggaga
acatgggacaggaagtacaagcactatgatgttacacccaggactgctatgatcgttgcc
aacctgccgcctgccagctctggagtggcacctataaaggcaacagtgcctctcagtcat
aacccaactgtaactactgcctctgtggcattgaccacaactagtgtgagcaccatattc
tccaccagcccttacacagcgtcagccaggcctgtctggactactaaaagggaaaatgac
acaaataattcagtcagtgaatctagcagctcaccaaaccttccactaacactcagggca
ccgaggactctgcagcctcctcctggaactttctacaagccgcctacttctattaacagc
agagcaaggacgcttcctaactggactactactgtcaccaccatcaccaccaccaccacc
accacctcctcctcacttgcccccatcacctctagccaggtagtcaccccatcccctgcc
cctacaagccccccaccgacacggctccagacgcaggactccactgacagcgccattgac
cctggggtctcgacctcagctagcctctcacccccccagtccccacccccaagtagccct
gacgacctcagccccagcgagactaaacccgtctaccaaagactgcgacctcggcggctg
caggagcttgaacacagagaagctcattttgtctga
DBGET
integrated database retrieval system
