Lates calcarifer (barramundi perch): 108884233
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Entry
108884233 CDS
T04895
Name
(RefSeq) ras-related protein Rab-31
KO
K07891
Ras-related protein Rab-22
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108884233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108884233
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lcf04031
]
108884233
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
108884233
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
108884233
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
TniB
AAA_16
MCR_beta
AAA_7
NACHT
DUF87
Motif
Other DBs
NCBI-GeneID:
108884233
NCBI-ProteinID:
XP_018533530
UniProt:
A0A4W6FQC8
LinkDB
All DBs
Position
LG4:6192505..6200870
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AA seq
194 aa
AA seq
DB search
MAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWD
TAGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKN
DLGDIREVPMKEAKEFAESIAAIFIETSARNAVNVEELFQKISKQIPPLENPEVDSNESF
KLTRQPTMSSRRCC
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctataagggagctcaaagtttgtcttttaggggacactggagttgggaaatccagt
attgtttgccggtttgttcaggatcattttgaccacaacattagtcccacaataggagca
tcgttcctgaccaagacagtgccatgtggtaacgaactacacaaatttctgatctgggat
acagccggacaggaaaggtttcactccttagctcctatgtactacagaggatcggctgct
gctgtcatcgtctatgatataaccaaactggactctttccagacactgaagaagtgggtg
aaggagctgaaggaacatggtccggaggacattgttgtagccatagcaggaaacaagaat
gatttaggagacatcagggaagttccgatgaaggaagctaaggagtttgctgaatcaatt
gcggctattttcatcgagactagtgccagaaatgctgtcaatgttgaggagctctttcag
aagatcagtaaacagattccgccgctggagaatcccgaggtggacagcaacgagtccttt
aaattgacccggcagcccaccatgtcctccaggaggtgctgctag
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