Lates calcarifer (barramundi perch): 108884281
Help
Entry
108884281 CDS
T04895
Name
(RefSeq) zinc finger protein GLIS1
KO
K09232
zinc finger protein GLIS1/3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108884281
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
108884281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
FOXP-CC
Zap1_zf1
zf-C2H2_8
zf_C2H2_ZNF292
Zf-C2H2_ZNF451_C
An_peroxidase
Motif
Other DBs
NCBI-GeneID:
108884281
NCBI-ProteinID:
XP_018533613
UniProt:
A0A4W6BP06
LinkDB
All DBs
Position
LG4:5335580..5381253
Genome browser
AA seq
612 aa
AA seq
DB search
MWPPDLGPPDVQLTLPGFGSVFEDAEDLQAPLSSGGFCQSSIHSAGLCCLPRTSLSLSSL
GRDLTSLLNCKTNGSHIEKTVEDFATTAHTDPKNTQRFGCYPQPSLPLSYMLTSCATSPS
FCSPSPSVTSTSSSSSLFFASSSPLSDANNKASPQQRKLQEEYHSIKQEPADDFMPCKRE
SFQMNNQQGELFHVGQPLQCHDGQDSTQTPLHSPRLNGPVGQDPAADQQEQLCHWIDCSA
TYSSQEELVRHIEKVHIDQRKGEEFACFWAGCVRRHKPFNARYKLLIHMRVHSGEKPNKC
MFEGCSKAFSRLENLKIHLRSHTGEKPYICQHPGCLKAFSNSSDRAKHQRTHLDTKPYAC
QIPGCTKRYTDPSSLRKHVKAHSAKGLQEREVKVQVHTMLESDILSDCLARQHLHSSASS
HQGNSSPLPGLDDFTGVYSNSSSVHNRGNSEFIPPSADTCSRYQGLEGNFDANSPISSLT
SPGSMREGTRSTSLFMPADVSPVSSSSDRVDVRLQGYQKTYSHQQQVFSQQQGCLYGEGK
VVQSVNDGGFEPASYFTNPPTSHSTGFDLLQDLQGQAGGGYSMSPCPDDSFLFQAGGVDR
CLNQIYSIYLDS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtggccccccgacctcgggcctccagatgtccagctgactcttcctggttttgggagt
gtgtttgaagatgcagaggacctgcaggcaccgctgtcttctggtggcttctgtcagtcc
tcaatacattcagctggtctgtgctgtctaccaaggacctccctgtccctgtcctccctg
gggcgagacctcacctctttactcaactgtaagactaatggttcccacatagaaaagacc
gtggaggactttgccactacagcacacacagaccctaaaaacacccagaggtttggttgt
taccctcagccctccctccctttatcctacatgctcaccagctgtgccacatctccttct
ttctgctccccctcaccctctgttacctctacctcctcctcatcatctttattttttgcc
tcttcctcgcctctctcagacgccaacaacaaagcgtctccgcaacaacgaaagctacaa
gaagagtatcactccattaaacaggagcctgcagatgatttcatgccatgtaagagggaa
tcgttccaaatgaacaaccagcagggggagctgttccatgttggccagcccctccaatgc
cacgatggtcaggacagcacccagacccctctgcactccccaaggctcaacggacctgtt
ggacaggaccctgcagcggaccaacaggagcagctctgtcactggatcgactgcagtgcc
acgtacagcagccaggaggagctggtgaggcacatcgagaaggttcacatcgaccagcgc
aaaggggaggagtttgcatgtttctgggccggctgcgttcgccgccacaaacccttcaac
gctcgctacaagctgctcatccacatgagggttcattctggagaaaagcccaataaatgc
atgtttgagggctgctccaaggccttctcccgtctggagaatctgaagattcacctgagg
agccacacgggagagaaaccgtacatctgccagcaccccggctgcctcaaggccttcagc
aactccagtgatcgggccaaacaccagcgcacgcacctggacacgaagccatacgcctgt
cagatcccgggctgcaccaaacgctacaccgaccccagctcgctacggaaacacgtcaaa
gctcattcagccaaaggccttcaggagagggaggtcaaggttcaggtgcacacaatgctg
gaatctgacattttgagtgattgtctggcgaggcagcatctccacagctctgcctcttcc
caccaaggaaacagctcacctctaccaggcttagatgacttcacaggtgtgtactcaaac
agcagctccgtccacaacagagggaattcagagtttatccctccatcagcagacacctgc
tccaggtatcaaggcttagagggaaactttgacgccaacagcccgatatcttcgttaaca
agtccagggagcatgagagaggggaccagatccacatcgttgttcatgccggctgacgtc
agcccagtgagctcttcatcagacagagttgacgtccggctgcagggctaccagaaaacc
tacagccaccaacagcaagtattctctcagcagcaaggctgtctgtatggagagggaaag
gtggttcaatcagtcaacgatggaggctttgaacctgccagttacttcacgaaccccccc
acctctcactccacagggtttgacttgttgcaggacctgcagggccaggcagggggcggt
tactccatgtctccctgcccagacgacagcttcctcttccaggcgggaggcgtcgaccgc
tgcctcaatcaaatctactccatctacctggactcgtga
DBGET
integrated database retrieval system