Lates calcarifer (barramundi perch): 108884287
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Entry
108884287 CDS
T04895
Name
(RefSeq) apolipoprotein L1 isoform X1
KO
K14480
apolipoprotein L
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108884287
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ApoL
Pam17
Rsbr_N
Motif
Other DBs
NCBI-GeneID:
108884287
NCBI-ProteinID:
XP_018533626
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All DBs
Position
LG4:5279705..5296113
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AA seq
1033 aa
AA seq
DB search
MDRYDNLDLDLECDGGGVAQKAALFGGMFKKSTKSAESSVQAQDNLSASSELSKSNDSLT
DNNNTKDKGGVFKGMFKKTTKSAKEVQPQATLSLQNPELSDSRDSLTDNKKSSKDKPGVL
GGILKRPKLGHVRRPSQDLLDNELSASNDSLSENTNTKESGGMFSGMFKKSPKLGVRTQS
QDDLSAPSELSGSNDNLSANGNTKESGGMFSGIFKKSKPFGARTQSQEDLSAASELSGSN
DNLSENNAKEKGGFLSVFKKKAARSQSQDDLSVEDELSGSTDSLTEKPSKGGVATKIRKN
PFTSSSQEKEKTEHSGDSNENTSSTEKPKAKQNGFSAMMKSTFYTDKQEKNSDSDDEETL
DNGEGQQSHKQNKLAGAMTKLNPFRSAHKNEKLTGSDDEDPPASSDKSSGNKQNAMIGAM
SKLNPFRSGNKKDTEDTEALKENEKQVEEPKMVKSNMNQRERKEKSETPLVPPRPTEEEM
KRTFTYDKVKSRGTEDNHNQDKIDTTSRQKKEKPAETPVVPTRPTGEEMNRGARRDMQKQ
KTNHQSQSDDEGLKQDDSAEAKDEDEVNPPESKTAKVKKHTHHNPFMPRVAAKAASDDEE
LKEEDESSSKEEKKDEEDKDKKETKVKKPKRHNPFMPRVKAKAVQKPAGDGAADNTAENE
GGNRSLFDQLEDFRIDPAQPENEQDVEDLMEWWNTVEPWEDTPQDDDMTEKEEAKAFAVT
AEKVQKGIRVFNKLFSERAESLWQHVIDLNGIADALDKFNKKTKIAQITGGSTSAIGGVA
TIAGLALAPVTMGTSLIVTAVGLGVATAGGLTSAGAGISNQVNNSMDRKKVEKIVEDYQE
KMVDLNKCLKFIKQGIENLRKFDLIRMKKHAYNRDFPVLSSSFYEDGAMAGKAILINANE
IMRVVQIANMAGSTAARAVQIASMATGVLTGFFVGMDIYFVAKDSKELKKGAKSEFAAKI
REVATQLHDGLVELNSIREELQSTTPENNPDKDTAALDDDKKEKDDRYDSSEEDEIDRIK
KAIKKDYENREYV
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggatcggtacgataacctggatttggatttggagtgtgatggaggaggcgttgcacaa
aaagcagcgttattcggtgggatgttcaagaaatccactaagtctgcagaatcctctgtc
caagcacaggataatttatcagccagcagtgaactttcaaagagcaacgacagtctgacc
gacaacaacaacaccaaggacaaaggaggcgtgttcaaaggaatgtttaagaagacgacc
aaatctgccaaagaggttcagccacaggccaccctgtcattacaaaatcctgaactctct
gacagtagagacagtttaacagacaacaagaagtcatcaaaggacaaaccaggtgttttg
ggtgggatactgaaacgacccaaactaggacacgtccggaggccttcacaggatcttttg
gacaatgagctctcagccagtaatgacagtctgtctgagaacacaaacactaaggagtca
ggtgggatgttcagtgggatgtttaaaaaatccccaaagcttggagtgaggacccaatct
caggatgatttgtctgcaccaagcgagctctcaggcagcaacgacaatctttctgcaaat
ggcaacactaaggagtcaggtgggatgttcagtggaatatttaaaaaatcaaagcctttc
ggcgcaaggacacaatctcaggaggatttgtctgcagccagcgagctctcaggcagcaat
gacaatctttctgagaacaacgcaaaggagaaaggaggatttctaagtgtgttcaagaaa
aaagctgccagatctcagtctcaggatgatttatctgtggaagatgaactctctggcagc
acggacagtctcacagagaagccttcaaagggtggggtggcaacaaagatccggaagaat
cctttcacttcctcatctcaggagaaggaaaagactgaacactctggagactcaaatgag
aatacctcctccacagagaaacccaaagccaagcagaacggtttcagtgcaatgatgaag
agcacgttctacactgacaaacaggagaagaactccgattctgatgatgaggagacattg
gacaatggagagggccagcagagtcacaaacagaataaacttgctggggcgatgacaaag
ctgaatccatttcgatctgcacacaaaaatgagaagctgacaggttctgatgatgaggat
ccacctgcaagcagcgataagtcatcaggcaacaaacagaacgccatgattggagccatg
tccaaactgaatccatttcgctctggaaacaaaaaagacactgaagacacagaggcactc
aaggagaacgagaaacaagtggaggagccaaaaatggtcaaaagcaacatgaaccagcga
gaaaggaaagaaaagagtgaaactccattggtcccacccagaccaactgaagaggaaatg
aagaggactttcacatacgacaaagtgaaatcaagaggaactgaggataatcataatcag
gataaaattgacacgacctccagacagaaaaaagaaaagcctgctgagactcctgtagtt
cctaccagaccaacaggggaggagatgaacagaggagcgagacgtgatatgcaaaagcag
aagaccaaccatcagagccagtcagatgatgaaggtctcaaacaggatgactctgcagag
gccaaagacgaagatgaggtgaaccctccagagagcaaaacagccaaggtgaaaaaacac
acacaccataacccgtttatgccacgtgttgcagccaaggctgcatctgatgatgaggag
ctgaaagaagaagatgaatcttcgtccaaagaggaaaagaaagatgaggaggacaaggac
aaaaaagagaccaaagtcaagaaacctaagcgacacaatccctttatgccacgggtcaag
gccaaagctgtacagaagcctgcaggagacggagctgcagacaatacagcagagaatgaa
ggtggaaacaggtccttgtttgaccagctggaggacttccgtattgatccagcacagcct
gaaaatgagcaggatgtggaggatcttatggaatggtggaacacagtggagccatgggaa
gacacacctcaagatgatgacatgacagaaaaagaagaggccaaggcgtttgctgtgacg
gctgaaaaggtgcagaagggaattcgtgtcttcaacaaactgttttcggagcgcgctgag
agtctctggcagcacgtcatcgacctcaacggcattgctgatgccctggacaagttcaac
aagaaaacaaagatcgctcaaatcaccggcggctccaccagcgccatcgggggtgttgcc
accatcgccggccttgctctggccccagtcactatgggaacctctttgattgtgacggca
gtgggattgggcgttgccactgcgggcggtctgacctcagcaggtgccggcatctccaac
caggtcaacaactcaatggaccgcaagaaggtggagaagattgtggaagactaccaggag
aagatggtggacttgaacaagtgcctgaaattcatcaagcagggtatagagaacctgcgc
aaatttgacctgatcaggatgaaaaaacatgcatacaatcgtgacttccctgtgctcagt
agtagtttctatgaggacggtgccatggcaggaaaagctatcctcatcaacgccaatgag
atcatgcgtgtggttcagattgccaatatggccggcagcacagcagccagagcggtgcag
atcgccagcatggccactggtgtgctcactggcttcttcgtaggtatggacatctacttt
gtggctaaagactccaaagaactcaagaaaggagcaaagtcagagttcgctgccaaaatc
agggaggtggcaacacaactgcacgatggtctggtggagctcaactcgatacgagaggag
ctgcagtccaccacaccagaaaacaaccctgacaaagatacagctgctttggatgatgac
aagaaagagaaagatgatagatatgacagttcagaagaagatgaaattgaccgcattaaa
aaagccatcaaaaaggactatgagaatcgagaatatgtgtga
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