Lates calcarifer (barramundi perch): 108884320
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Entry
108884320 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: WASH complex subunit 2
KO
K18462
WASH complex subunit FAM21
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108884320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108884320
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Others
WASH complex
108884320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP-ZIP_m
Motif
Other DBs
NCBI-GeneID:
108884320
NCBI-ProteinID:
XP_018533682
UniProt:
A0AAJ7PNC2
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All DBs
Position
LG16_LG22:8465636..8476189
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AA seq
1450 aa
AA seq
DB search
MSGLPEGMTNGPSRSEHLEKDAQIWERPWTLEEMRQSSANWSLAADSGLFLFLQDFSHRM
LSKTHEIEKQLDSLIRDTKATDSCLHSVFNDFLMLSNTQFIENRVYDEEVEDAIPKADAL
EKQPEQEKTREQKEAELIPKMQEAVNYGLRVLESAFEHLDIKAGNSDSEDEEVTDRVEAI
LEPKDLYVDRPLPYLIGSQAFMEQDDVGLGDLSSDEMSVDSDRDSVIESEDGKEAVHSDD
DFNQDEDEGHNNIKTKSSMLSYDDDDEEEDEDSDIFGESDKDDDDDTQNTGPSSFADELA
ARIKGEPVNKPEGDRASLTSKKKSKGRKEPKPSKSQAADDDSDDMFKPPKMDEDDFSPFG
GKSGLFSGGKGLFDDDDEGDLFSEAPKPSVSEAKKAMTESTKSTAQSAETGKPGKKIPTD
NSLFSSGNDSDSVRSKENGTPVPKTNAASKSVPSGPGIGGGGGGLFDDDDEDDDFFSGKS
LKKSDSAGKEKPKPKRAVDLFDEDDEDGDIFSDKYSVPTPAQSKKEAVEEQAKPPEKKMP
AGAISMFGPGTKSLLSEGLKKRQPSTSEESEKSEENGPAPDVGKAAVKQTQKPQSRGLFS
DDEDTQIFPTIPKSQSKPEPTSQSKTSKAPLSLFDDEEEEDLFASAAKSKPKPNQAKVST
PQPSKTVSSSLFSDDEDQWISSKSSATKPETKTVGMKPSASAPSSLPSAKTSQKSSLFDD
EDDDDLFAPTKESSQKKPQRVALLFEDEGHDDEDKGSLFGVKPTVNTNNAAPAAKTPAVA
SQPPSQLQKSAAEDKPSPQEKPVAKTPELLPSTALPENSESKKKPAGAVSLFGGINVLDG
KQTKSPLDEDDNNDSLLSKGSSPPSVKKEEKKEQKKEEKVKTKTVSLFEDEEEDESDWND
PIFTPSKPTGRNTLKPTEERPQAKSTGVFQDEELLFSQTQQKDNDPDVDLFATSGKAASS
VKPAAQSLFADDDEDDLFSSTKPKAPPPKVAEKPSKPADKAPLASPESVSEIQKPAPSPV
KPKDSSSRIGKLQANLMINPAALLPGAAPTMPGAVSVLPGMGPSSSSGVSSSSLSPSPAT
TPVGAQTDSEGGVSFDTPVQVTTLQSAHKSRAKGSAYRRPQSRAARQQAAQRSAEDREAT
LGGDVPGPNPSLSGLVLPPPDISSQTHVSPTLSNSAAPAALPASSFSQPSLPEISPRASV
LTLPVSTNAGKKDSSKDKLSTKVLQSSDEDDLFGSDSLFESTSVTNTPSARQTTKTTQPQ
ASSGVGLKKDKDKSTLPSIFDDNTDDLFQKVKPKSTTKKAMASSFLEDDDDDEDIFGVSN
SSTPSSTSSKEIKNNTSFSKQDIFQDEVASVPKVHKKHKEKAIDASLFDDDIDIFADLTD
TLKPKQKSKTKGETKSIFDDDMDDIFSPSTVKPVAKAPSKSKKTPPSQETSTAADSSNIF
DDPLNALGGN
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgagtggattgccagagggaatgacaaatggccccagcaggagcgaacacttagagaaa
gatgctcagatctgggagagaccctggactcttgaagagatgcgacagagcagtgccaat
tggtctctggcagctgactcggggctcttcctgttcctccaagacttctcccacaggatg
ctgtcaaagacgcatgagattgaaaagcagttggacagtctgatccgtgacaccaaggcc
acagacagctgcttgcactctgtctttaatgactttctcatgctctccaatacacagttt
atagaaaatagagtgtatgatgaagaggtagaagatgctataccaaaggctgatgcattg
gagaagcagcctgaacaggagaagactcgagagcagaaagaggcagagttgatccctaag
atgcaggaagctgtgaattatggtttgagagtacttgagtcagcctttgagcatctggac
atcaaagcaggaaactctgactcagaggacgaggaggtcactgacagagtggaggccatc
ctagagcccaaggatctttatgtggacaggccacttccatatctgattggttcccaggcc
ttcatggaacaagatgatgttggacttggtgacctctcaagcgatgaaatgtcagtcgac
agtgaccgagacagtgtgattgagagtgaagatggcaaagaagcagttcattcagatgat
gatttcaatcaggatgaggacgaaggtcataataatattaagacgaagtcatccatgttg
agttatgatgatgatgacgaggaggaggatgaggattctgatatatttggagaatcagac
aaggatgatgatgatgacacgcagaacacaggtccatcgtcctttgctgatgagctggca
gcccgaatcaaaggtgaaccagttaacaaaccggagggagatcgggcatcattgacatct
aagaagaaaagtaaaggcagaaaagaaccaaagccttcaaagtcacaggcagctgatgac
gacagtgatgacatgtttaagccaccaaagatggatgaggacgacttctccccatttgga
ggaaaaagtggcctcttcagtggagggaaaggcctgtttgacgatgatgacgagggtgat
cttttctctgaggcaccaaaaccttctgtgtctgaagcgaaaaaagcaatgactgaaagc
acaaaaagcacagctcagagtgcagaaactggcaaacctgggaagaagattccaacagat
aacagcctgttcagttcaggaaatgactccgattcagtgaggagcaaggagaatggaact
ccagtccccaagaccaatgctgcttccaaatcggttccttcaggacctggtatcggcgga
ggaggaggagggctgtttgatgatgacgatgaggatgatgatttcttcagtggtaaaagc
ctaaaaaaatctgactctgctggaaaggagaaacccaaacccaagagggctgttgacctc
tttgatgaagatgatgaggatggtgacatattcagtgataagtacagtgtgccaactcca
gctcagagcaagaaggaggctgtggaagagcaggctaaaccacctgagaagaagatgcca
gctggggccatctccatgtttggtcctgggactaaaagcttgctcagtgagggcctgaaa
aaacgtcagccatctaccagcgaggagtctgagaaatctgaggagaatgggcctgctcca
gatgttgggaaagctgctgtcaagcagactcagaaaccccagtccagaggcctcttctct
gatgatgaagacacacagatatttccaaccattcccaagagtcagtctaaacctgaacct
acaagccagagcaaaaccagcaaggcccctttgtcgttatttgatgatgaggaagaggag
gatctgtttgcgtctgcagctaaatctaaaccaaaacctaatcaagctaaagtctccaca
ccacaacccagtaagactgtgtccagctccctcttcagcgacgatgaggatcagtggata
agttccaagagtagcgcaacaaagccagagaccaagacagttgggatgaagcccagtgcg
agcgccccctccagtctccccagtgccaaaacatctcagaagagtagcctctttgatgac
gaggacgatgatgacctatttgctccaacaaaagagtcaagtcagaagaagcctcagaga
gttgcactcttgtttgaagatgaaggtcatgacgatgaagataaaggatccctctttggt
gtcaaacctactgtcaacacaaacaatgcagccccagctgctaaaacacccgctgtggcc
tctcagccgccctcccaattacagaaatcagcagcagaggacaagccgtcaccgcaggag
aagccagttgcaaagacccctgagctgctcccatcaacagctttgccagaaaatagtgaa
agtaaaaagaagcccgctggagctgtcagtctctttggaggcattaatgttcttgacggc
aagcagacaaagagcccactggatgaagatgacaataatgacagcttgctctctaaggga
agctcaccaccaagtgttaagaaggaggaaaagaaggaacagaaaaaggaagagaaagtt
aaaacaaaaactgttagtctgtttgaagatgaagaggaagatgaatcagactggaatgat
cccatattcacacccagtaaacccacgggcagaaacacactaaagcccacggaggagcga
ccacaggcaaagagcacaggtgtgttccaggacgaggagctgctgttcagtcagacgcag
cagaaggacaatgacccagatgttgacctctttgccacctcagggaaagctgcaagctca
gtgaagccagcagcacaaagtctgtttgcagatgatgatgaggacgacctcttcagctcc
accaagcccaaagctcctcctccgaaagtagcagagaagcctagtaaacctgctgacaaa
gcaccgctagcaagtccagaatctgtctcggaaattcagaaacctgcaccaagccctgta
aaacctaaagattcctcatcaaggattgggaaacttcaagccaatctgatgatcaaccct
gctgcgttgctccctggtgctgctcccactatgccaggggctgtcagtgtcctccctggc
atgggtcctagttcctcctcaggggtgtccagctccagcctgagtcccagccctgccaca
actcccgtaggagcccagacagacagtgagggaggagtgagcttcgacaccccagtccag
gttacaacactgcagagtgcacataagagtcgtgccaaaggttcagcatatcggagaccc
cagtccagagctgcgcggcagcaagctgcccaaagatctgcggaagatagagaagcaacc
ctgggtggagatgttcctgggccaaatcccagtctgtctggtttagtcttacctccacca
gacatatccagccagacccatgtcagtccgacactatctaactcagctgcacccgcagcc
ttgcctgcctcttcattttctcaaccttcactccctgaaatctcccccagagcctcagta
ctcacactgccagtatctacaaacgctggaaagaaagactctagtaaggacaagctcagt
accaaggtgctgcagtcttctgatgaggatgacctttttggctctgacagtctgtttgag
tccacttcagtcactaacacgccctcggccagacagactaccaagactacacaacctcaa
gccagtagcggagtgggattgaagaaagacaaagataaaagcacactcccatccattttt
gatgacaacactgatgaccttttccaaaaggtcaagccaaagtcaactactaagaaagcc
atggcctcatcctttttggaagatgatgatgatgatgaggacatctttggagtgagcaac
agttccactccctcatccacaagtagtaaagaaatcaagaacaatactagtttttcaaag
caggacatcttccaggatgaagtagcctctgtgcctaaagttcacaagaagcacaaagag
aaggccattgatgccagcttgtttgatgacgacatagacatttttgctgacctgacagac
actttaaaaccaaaacagaagtccaagacaaagggagagaccaagtcgatatttgacgat
gacatggatgacatcttctcaccaagcacagtaaaaccagtggcaaaggctccatctaaa
tcaaagaagacaccaccatcccaggagaccagtacagctgcagattcaagcaacatattt
gatgatccacttaatgctcttggtgggaactga
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