Lates calcarifer (barramundi perch): 108884321
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Entry
108884321 CDS
T04895
Name
(RefSeq) cell adhesion molecule 3 isoform X1
KO
K06780
cell adhesion molecule 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108884321
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108884321
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Nectin family
108884321
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
C1-set
C2-set_3
Syndecan
SAG
Lep_receptor_Ig
Motif
Other DBs
NCBI-GeneID:
108884321
NCBI-ProteinID:
XP_018533678
UniProt:
A0AAJ7LXY2
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Position
LG4:4784573..4867947
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AA seq
410 aa
AA seq
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MAFPSAPSALWSVSLLTVLFAAAVHSNIVFDDDPLQPVTSDETVSVGGTVTLTCRVAESD
NSSLQWSNTAQQTLYFGEKRALRDNRIQLHRSTPTELSITIADVQLSDEGEYTCSIFTMP
VRTARATVTVLGVPGKPQISGFENAVQEGGKVTLTCTSTGSKPPATLKWYRGDQELQGRL
DVVEPVQDNPTYTVSSELTLEVSRNDDNALITCVVDHASLAPGDKRSEQALRVLYSPNVE
IHPESDLPREGEKFYLQCLGNGNPEPTSYLWEKKDGELPPLAKADGAFLRFEMLNKSDNG
VYLCQANNGIGVSKGEYTLLVQDAADNIADPTAMLTSSGVDHAVIGGVVAVIVFILLCLL
IVLGRYLIRHKGTYLTHEAKGSDDAPDADTAIINAEGGHSGAEDKKEYFI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggccttcccatcagccccctccgcattatggagtgtcagcttattgacagtactgttc
gcagctgcagttcacagcaacattgtctttgacgatgaccccttgcagccggtgacctca
gatgagacggtgtccgtggggggcacggtgacactgacctgccgggtggccgagagcgac
aactcctcactgcagtggtccaacactgcacagcagaccctgtactttggagagaagaga
gcgcttagagataaccgcatccagctgcaccgctcgacacccaccgagctttccatcacc
atcgctgacgtgcagctgtctgacgagggcgagtacacctgctccatcttcaccatgcca
gtccgtaccgccagagccaccgtcaccgtgctaggcgtgcctggtaaacctcagatctct
ggctttgaaaatgcagtccaggaggggggcaaagtcaccctgacctgcaccagtaccggc
agcaaaccccccgccacgctgaagtggtaccgcggagaccaggagctgcaagggcgtctg
gatgtggtggagcccgttcaagacaatcccacatacaccgtgagcagcgagctcaccctg
gaggtgagccgcaacgacgacaatgccctcatcacctgcgtcgtcgaccatgcatctctc
gccccgggggacaagaggagcgagcaggctctgcgggtgttgtattcccctaacgtggag
atccatcctgagagcgatttgcccagagagggggagaagttttatctccagtgtttgggc
aacggcaacccagagcccacctcctacttgtgggagaagaaggatggagagctcccccca
ctggccaaagccgacggtgctttcctgcgcttcgagatgctcaacaaatcagataatggc
gtctacctctgccaagccaacaacggcatcggagtcagcaagggggagtacacactcctg
gtgcaagatgctgcagacaacattgcagaccccacggccatgctgacctcttcgggggtg
gaccacgctgtgatcggaggggtggtggctgttatcgtcttcatcctgctctgcctcctc
attgtcctcggcagatacctcatcagacacaaaggaacatatttgacccacgaagccaag
ggctcggacgacgcccctgacgctgacacggctatcatcaacgcagagggaggccactcc
ggagcagaggacaagaaggagtacttcatctag
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