Lates calcarifer (barramundi perch): 108884428
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Entry
108884428 CDS
T04895
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00071
Fatty acid degradation
lcf01212
Fatty acid metabolism
lcf03320
PPAR signaling pathway
lcf04148
Efferocytosis
lcf04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
108884428
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108884428
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108884428
03320 PPAR signaling pathway
108884428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108884428
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
108884428
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108884428
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
ATP-synt_E_2
Motif
Other DBs
NCBI-GeneID:
108884428
NCBI-ProteinID:
XP_018533831
UniProt:
A0AAJ7LWA3
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Position
LG23:complement(8387748..8402816)
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AA seq
785 aa
AA seq
DB search
MAEAHQAVAFQFTVTPEGIDLQMSHQALTEIYLSGMRSWKKRIIRLKNSVITGVYPASPS
SWLFVVIAILATMYTRSDPSMGLIAKIQEHLPVSQSMSTQCQAVVSAVLFSTMLWLLLIF
TMRLCLKQLLSYHRWMFEQHGKMSNTTKVWVALVRIFSGRKPLLYSYQGSLPNLPVPAIK
DTVKRYLESVRPLMDDTKYERMTKLAEEFESSLGNRLQWYLKLKALWASNYVSDWWEEYI
YLRGRSPIMVNSNYYGMDFLYVTPTPIQAARAGNSIHAFFLYRRKLNKEEIKPSRIPGTV
IPLCAAQCERMFNTTRTPGEETDTVQHWQDSDYIVVYHRGRYFRLRVYQAGRLLSPREIE
FQIQRILDDPSPPCKGEAKLGALTAGDRIPWAKARMKYFSSGVNKRSLDCIEKAAFFVAL
DDDEQGMMGDDPAASLDRYAKSLLHGKCYDRWFDKSFSVVYYKNGKNGINAEHSWADAPV
LSHLWEFTLAFDSFQLGYNAEGHCKGDVDSSLPRPQKLSWEIPPECEEQISQSLAVAQAL
ADDVDFHVFPFQDFGKGKIKKCRVSPDAFIQMALQLAYYRDQKRFCLTYEASMTRLFREG
RTETVRSCTNESRAFVQAFDGGEAADVCSRLFRTALEKHQLLYRLAMTGAGIDRHLFCLY
VVSKYLGVESPFLKEVLSEPWRLSTSQTPVQLSEMFDPVNHPEYVSPGGGFGPVADDGYG
VSYCVVGDCMINFHISCKRSCPVTDTHKFGAQIRKALHDLLQLLSPTQKEPSKVEESRPE
VKKDL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcccaccaggcggtggccttccagttcacggtcaccccagagggcatcgat
ctgcagatgtcccaccaggccctcactgagatctacctctctggcatgcgctcgtggaag
aagcgtatcatcagactcaagaacagtgtgataacaggggtatatcctgccagcccttcc
tcctggctttttgtggtcatagcaatcctggctactatgtacactcgctctgacccctcc
atgggcctcatagccaagatacaggagcacctcccagtcagccagtcgatgagtacccag
tgccaggcggtggtgtcagcggtgctctttagcaccatgctatggctcttgctcatcttc
accatgcgcctgtgcctcaagcagctcctctcctaccaccgctggatgttcgagcaacac
ggcaagatgtctaacaccactaaagtctgggtggcgctggtgcggatcttttctggcaga
aagcctctgctctacagctaccaggggtcgctgccaaatctgcctgtgcccgccatcaag
gacacagtcaagaggtatttggaatctgtgcgtccattgatggacgacacaaagtatgaa
cgcatgaccaagctggcggaggagttcgagagcagcctgggtaaccgtctgcagtggtac
ctcaaactcaaagctctctgggcatccaactacgttagtgactggtgggaggaatacatc
tacctgcggggacgaagccctatcatggtcaacagtaactactatggcatggacttcttg
tatgtaacacccacgcctatccaagcggccagggcaggcaacagcattcacgcgttcttc
ctgtaccgtcgcaaactcaacaaagaggagatcaaacctagtcgtataccaggcactgtc
attcctctgtgtgccgctcagtgtgagaggatgttcaacaccacacgcactcctggagag
gagacggacactgtgcaacattggcaggacagtgattacatagtggtataccacaggggt
cgctactttcgtctgagggtgtaccaggcgggcagactcctgtcgcctagggagattgaa
ttccagattcagagaatccttgatgacccttcacctccttgcaaaggagaggccaaactt
ggggctctgaccgctggagacagaattccatgggctaaagccaggatgaagtatttcagc
agtggggtcaataaacgctccctggactgcatcgagaaagctgccttctttgtggccctg
gatgatgatgaacagggtatgatgggagatgaccctgcagccagtttagatcgctatgcc
aagtccttgttgcatggaaaatgttatgacagatggtttgacaagtccttctcagttgtt
tactacaagaatggaaagaatggcataaatgcagagcactcgtgggctgatgcaccagtg
ttatcgcacctatgggagttcaccttggcctttgacagtttccagctgggttacaatgca
gagggtcactgcaaaggagacgtggattcatcactgccacgaccacagaagctgagctgg
gaaatccctccagaatgtgaggagcagatctctcagtccctggcagtggcccaggccctg
gccgatgatgtcgacttccacgttttccccttccaagactttggcaaaggaaagatcaag
aagtgtcgagtcagtccagatgccttcattcaaatggctcttcagctggcctactacagg
gaccagaagaggttttgtctgacgtatgaagcttccatgacccgtctgttcagggagggc
aggaccgagactgttcgctcctgcaccaatgagagcagggcctttgtccaagcattcgat
ggtggagaggcagcagatgtgtgcagtcgtttgttccgcactgcgttagaaaagcaccag
cttctataccgcttggctatgaccggagctggcatcgacagacacctcttttgcctctac
gtggtttccaaatacctcggagtggagtctcctttcttgaaagaggtgctgtctgagccc
tggaggctgtccaccagtcagactcctgttcagttgtcggagatgtttgacccagtcaac
cacccagagtatgtctcccctggtgggggctttggtccggtggctgatgatggttatggg
gtgtcctactgcgtagtgggagactgcatgattaacttccacatctcgtgcaagcgctca
tgtccagtcactgacacccacaagtttggtgctcagatcagaaaggctctgcatgacctg
ctacagctgctgagccccacccaaaaagagcccagcaaagttgaagagagccggcccgag
gtcaagaaagacctgtag
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