Lates calcarifer (barramundi perch): 108884565
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Entry
108884565 CDS
T04895
Name
(RefSeq) antigen WC1.1
KO
K06545
CD163 antigen
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108884565
CD molecules [BR:
lcf04090
]
Proteins
108884565
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
FAM176
DUF2167
DUF3896
Motif
Other DBs
NCBI-GeneID:
108884565
NCBI-ProteinID:
XP_050926935
UniProt:
A0AAJ8DPQ8
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Position
LG6:3877365..3890240
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AA seq
1240 aa
AA seq
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MMWFFLLLLSAHTELVFLQDKHRLILEGKDNPCEGHVKIYHKNQWGYVGDKNWNRTTEEV
VCRSTHCGKPEDNATENVLRPIKSKVWLNEVRCSGHEKHLEECEYLGPGWGISVYRKETV
KKIKCSNKIKISLEGSRCAGVVQYAIDEKTPPGYFCADSWGKDEYNFLCGKLGLCLINGH
ERLQLKGDASNVCSGQLETEENGTWKSAENITTPASEWCQRMNCGTKNSHVGTNLTCTDN
VTVVLKDNNKSTKCYGEVHINKNGKDYAVCGSTWSKKEAEVVCKELGCGRVIDHSPQSTS
LQVIMDNVNCLGNESSLWHCRARHLGKDTHRCSSIAYVVCSESLNARLVDGPGKCAGRVE
IQYKGRWRQVRKDSEWTDDNSNSVCKEMECGKMRKSTGPGKFSQGSGDFLSNPVKCNKDA
NNISACDIEIERSTAVGNNEAVGVICEDHKVIFLEGNNSCSGKVVIEHGDTSYWLSGSNN
TWNSVSGKIVCQQIHCGNFVNFSTVPAEKERSIWSESYYCSDPTTRSLFECKNESSNASD
RIATVTCSGNKTVSLTETCWGNVKVCFGGKCGGVCADSWTKDLSELLCKSLDCGNTVLSA
TKMHDKTMQWIFKSLHPTNQTTNLNQSSIVLNDTNICTQKAAYVVCSGSVKPQFDTPRDK
CVGNVVVSFEDQWLPVCTNALQNKQEQDAMCEALECGQAVKMTGYFGPKPGNKPFISELQ
CSSTEKMSLKSCNKITAKTSTCTPAVLQCNKWKKMTVSETCSGIVVVHSNENRGQVSFDG
WTNTDGDRLCKDLECGSVKSNQNYSTSEKHSVWGKTFNCTYQNNTENIWDCEMQNSSSQQ
LLSIDCRDKPRVTLSEKCGGAVMINEIQVCDTHWKKEYSDMICQEQNCSNALHFSTTGPQ
PDPATDYYHVSCDDYHHELGQCKRVKGKCAGKLVSVNCVGNVQFNTTEKCGGSIKVSYIK
NTWEHVCTKELSDTFKEQLCKKLDCVGLNTTYRPSKREQLVSSIGLECTDDHMDIRHCLN
SNLSCEGVKPAEVFCKGYKAHTPPKKESKPVPVVPIILGVGLFLVLVILIVIFVRIYTVK
KAKNAMNDPSRMLSRKEVEFESGDYEDVTSKENEMEDLSRGRFRSEAEVMMETDARSTSS
FPYDDIDEAAEAQPLTSQAATAGASRDIHEDALNKSDDGVTYEVDDPQENYDDIEASSEI
TQTKAEVHNSPVTTPESESAVVPPGLVPGDVDYLVPGQDG
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggttcttcctccttctcctctctgctcacactgaattggtgttcttacaagat
aagcaccggctgattctagaaggtaaagacaacccgtgtgagggccacgttaaaatctac
cataaaaaccaatggggctacgttggagataaaaattggaacaggaccactgaagaagtg
gtgtgcagaagcactcactgtgggaaacctgaggacaatgcaacagaaaacgtgctacgg
cccattaaaagcaaagtgtggctcaatgaagtgagatgcagtggacatgagaaacatctg
gaggagtgtgaatatcttggtcctggatggggcatcagcgtctaccgaaaggaaactgtg
aaaaagattaaatgttcaaataagatcaaaataagcctggaaggatctcgatgtgcagga
gttgtccagtatgcaatagatgagaaaacaccgccaggttacttttgtgctgacagttgg
ggtaaagatgaatacaattttttgtgtggaaaactcggattgtgtttaattaatggtcat
gagagactgcagctcaaaggagatgcatcaaatgtctgctctggtcagctggaaacagag
gagaatggcacgtggaaatctgctgaaaacatcacaaccccggctagtgaatggtgtcag
agaatgaactgtggtaccaagaacagtcacgtgggaacaaatctgacttgcacagacaat
gttaccgttgttctgaaggataataataaatccaccaagtgctatggtgaagttcacatt
aataaaaatggtaaagattatgctgtgtgtggctccacctggtctaagaaggaagctgaa
gtggtttgcaaggagctgggctgcggaagagttattgaccacagtccacaatccacatct
ttacaagtgataatggacaatgtgaattgcttaggcaatgagtcctcactgtggcactgt
cgggccaggcatcttggcaaagatacacacaggtgttcatccatcgcttacgtagtctgt
tcagagagcctaaatgcgagactggtagacggccctggaaaatgtgctgggagagttgag
atccagtacaagggccgatggagacaagttcgtaaagattctgaatggacagacgacaat
tcaaacagtgtctgcaaagagatggaatgtggcaaaatgcgaaaatccaccggtcctgga
aagttcagccagggttctggtgatttcctctctaatcctgtcaagtgtaataaagatgcc
aataatatatctgcatgcgatatagagatagagagaagtacagctgtgggcaataatgaa
gcagtgggagtaatctgtgaggatcataaggtgatatttctggaaggaaataattcctgt
tctggcaaggtggtgatagagcatggcgataccagctactggctctctgggtctaataat
acatggaacagtgtgtcaggaaaaatagtgtgccagcagatacactgtgggaatttcgtc
aactttagcacagttcctgctgaaaaggagagaagcatttggtctgaatcttactactgc
tctgaccccaccaccagatctctgtttgaatgtaaaaatgagtcatctaatgccagtgac
cgtattgcaactgtaacctgttcaggaaataaaactgtaagcctgaccgagacgtgttgg
ggtaatgttaaggtttgttttggagggaaatgtggaggtgtgtgtgcagactcctggaca
aaagatttgtctgagttgctgtgtaaaagccttgactgtggaaatacagtcctatctgcc
accaaaatgcatgacaaaacgatgcagtggatcttcaaaagtttgcaccctaccaatcag
actaccaacctgaaccagagcagcattgttctgaatgatacaaacatctgtacacaaaag
gcagcctatgttgtttgctcaggaagtgtcaagccccaatttgatacccccagagacaaa
tgtgttggaaatgtggtggtttcctttgaagaccagtggctcccggtttgcacgaatgct
cttcaaaacaaacaagaacaagatgccatgtgtgaggctctggaatgtggtcaggctgtc
aagatgactggctattttggacctaaaccaggaaataaacctttcatttcagaactacag
tgttcttcaactgaaaaaatgtcattaaaatcatgtaacaagatcactgctaagacaagt
acctgcactcctgctgtcctccagtgcaacaagtggaaaaagatgacagtcagtgagacc
tgcagtggaattgtagttgttcactcaaatgaaaaccggggtcaggtttcctttgatggc
tggacaaacactgatggggacaggctttgcaaggatctggaatgtggcagcgtcaagtca
aatcagaattacagtacatcggagaagcattccgtctggggcaaaaccttcaactgcaca
tatcaaaataatacagaaaacatctgggactgtgaaatgcaaaactcatcctcacagcag
ctactctcaattgactgtcgagataagcccagggtcaccctgtcagagaaatgtggtggt
gcagtgatgataaatgaaattcaagtgtgtgacactcactggaaaaaagaatattcagat
atgatttgccaagaacagaactgtagcaatgctcttcacttctccaccacgggcccccag
cctgatccagctactgattactaccatgtcagttgtgatgactaccatcatgaacttggc
cagtgcaagagagtcaagggaaagtgtgctggaaaattggtgtctgttaattgtgttggc
aatgtccagttcaacaccacagaaaagtgtggaggttccattaaagtcagttacattaaa
aatacctgggaacatgtttgcaccaaggaactttcagatacatttaaggaacagctatgt
aaaaagcttgattgtgttggtctcaacacaacatacagaccttctaaaagagagcagctg
gtctcaagcataggcctggaatgcactgatgatcacatggacattagacactgtctcaac
tcaaacttgtcttgtgaaggagtaaaaccagctgaggtcttctgcaaagggtataaggcc
cacacaccccccaaaaaggagtccaaacctgtccctgtagtgcctatcatcctgggagta
ggattgtttttggttctggtgatattgattgttatatttgtacggatctacactgtcaag
aaagccaagaatgccatgaatgacccatcaagaatgctgtcaagaaaagaagtagagttt
gaaagtggtgactatgaggatgtcacaagcaaagaaaatgaaatggaggacctcagtcgt
ggcaggttcagatcagaggctgaagtcatgatggagaccgacgcacggagcacttcctct
tttccttatgatgatattgatgaagcagctgaggctcagcccctgacctctcaggctgcc
actgccggtgcctctagagacatccatgaagatgccctcaataaaagtgatgatggggtg
acctatgaggtggacgacccacaggagaattatgacgacattgaagctagttctgagatc
acacagaccaaagctgaagtccacaacagccccgtaaccacacctgaaagtgagagtgca
gtggtaccaccgggattggtgccgggtgatgtggactacctagtcccgggccaagatggg
tga
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