Lates calcarifer (barramundi perch): 108884607
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Entry
108884607 CDS
T04895
Name
(RefSeq) paired box protein Pax-6-like
KO
K08031
paired box protein 6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108884607
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108884607
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
HTH_23
HTH_Tnp_IS1
Homeobox_KN
DUF6115
Motif
Other DBs
NCBI-GeneID:
108884607
NCBI-ProteinID:
XP_050929311
UniProt:
A0AAJ8BAL3
LinkDB
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Position
LG10:26739596..26759935
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AA seq
422 aa
AA seq
DB search
MPWDSRSALKQGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGC
VSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLAEGVC
TNDNIPSVSSINRVLRNLASDKQQMGTVGAEGMFDKLKMLNGQTTWGGRSGWYAGTTLTT
TECPQAEGGESTISVSSNGEDSEETQMRLQLKRKLQRNRTSFTQDQIEALEKEFERTHYP
DVFARERLANKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQMSNSSNHIPISSSFNTSV
YQPLPQPTTPVSFSSGSMLGRPDPVLSNSYSIPAMPSFSMAASLPMQASSQTSYSCMLPT
SPTVNGRSYETYTPPHMQPHINSQSMTSSATSSTGLISPGVSVPVQVPGSEAEMSQYWPR
LQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgggacagccgtagtgctctaaagcagggtcacagtggagtaaaccagctggga
ggtgtgtttgtgaatgggagacctttacctgattctaccaggcagaagatagtggagctg
gcacacagtggagctcgaccctgtgacatatccagaatactgcaggtgtctaacggctgt
gtcagtaagatcctgggccggtattacgagacaggttcaatccgtcctcgggccatagga
gggagtaaacccagggttgccactccagaggtggtgggaaagattgctcagtacaagaga
gagtgtccgtccatttttgcctgggagatcagagaccgactgctggcagaaggagtctgc
accaacgacaatatacccagtgtttcatcaataaatcgagtgctgaggaacctggccagt
gacaagcagcaaatgggcacagtgggagctgaggggatgtttgacaaactcaagatgctc
aatggacagaccacctggggaggacgctcagggtggtacgctgggactacactcactacc
acagagtgtccacaggcagagggaggggagagcaccatatcagttagttctaatggtgaa
gactcggaggagactcagatgagacttcagctgaagcgaaaactgcagagaaacagaaca
tctttcacacaggaccagatagaagcactggagaaagaatttgaaaggactcactatcca
gatgtttttgcccgagaacgcctagccaacaaaatagaccttccagaagcaagaatacag
gtttggttttccaaccgacgagcaaagtggagaagagaggagaagctgcgaaaccaacga
cgccagatgtccaactcctccaaccatatccccatcagcagcagcttcaacaccagtgtt
tatcagcctctaccacaacccactacaccagtgtccttctcatcaggatccatgctggga
aggccagatccagttttgtccaacagctacagcataccagccatgcccagcttcagtatg
gctgccagcctgccgatgcaagcatccagccagacctcttattcctgcatgctgcccacc
agccctactgtaaatggaagaagttatgaaacatatactcctccacacatgcagccacac
atcaacagccagtcaatgacgtcttctgcaacgtcgtcaacaggactgatttcccctggt
gtctcagttccagtccaagttccaggaagtgaagcagagatgtcacagtactggccacgc
ctgcagtga
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