Lates calcarifer (barramundi perch): 108884627
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Entry
108884627 CDS
T04895
Name
(RefSeq) ras-related protein Rab-17
KO
K07909
Ras-related protein Rab-17
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108884627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108884627
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lcf04031
]
108884627
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
108884627
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
108884627
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AGS_C
Gtr1_RagA
AAA_16
Motif
Other DBs
NCBI-GeneID:
108884627
NCBI-ProteinID:
XP_018534150
UniProt:
A0A4W6FRX3
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All DBs
Position
LG1:25359086..25362627
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AA seq
198 aa
AA seq
DB search
MVLLGSSGVGKSSLALRFGKDEFRSTTPTVGCAYLTRVVHLSDVTLRFEIWDTAGQEKYH
SVTPLYYRGAHAALLVYDISKRETFIRAQVWLKELEKQYTPGSTVMWLVGNKGDLAQDRQ
VSVQEGQALANDRDLSFTETSALAGDQVSELLLAIAHRVYKCIGAQQGRLSEWREAPLVD
LHHRDTFTPFASCCKVGP
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggtacttctgggaagttctggtgtgggaaagtcaagtttggcgctgcgatttggcaaa
gatgagttcaggagtacaacacctactgtaggctgtgcctaccttacccgggtggtgcat
ctgagtgacgttactcttcgctttgagatatgggacacggcagggcaagaaaaataccac
agtgtcactccgctttactacaggggagcccatgctgcactcttggtctatgatatcagc
aaaagggaaacatttatcagagctcaagtgtggctcaaagagcttgagaaacagtacacc
ccaggatctactgtcatgtggctggtgggcaacaagggagatctcgctcaggataggcaa
gtctcagtgcaggaaggacaggctctggccaatgacagggatttatcctttacagagaca
tcagccctggcaggggatcaagttagtgagttgctgctagctatagcccacagagtgtac
aagtgtattggagcacagcagggacgtctgtcagagtggcgggaggcaccacttgttgat
ctgcaccatagagacacattcactccttttgcatcctgctgcaaagtcgggccctaa
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