KEGG   Lates calcarifer (barramundi perch): 108884656
Entry
108884656         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: nestin
  KO
K07609  nestin
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108884656
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type VI
     108884656
SSDB
Motif
Pfam: Filament
Other DBs
NCBI-GeneID: 108884656
NCBI-ProteinID: XP_018534193
UniProt: A0AAJ7LZ21
LinkDB
Position
LG15:complement(2009196..2018461)
AA seq 1315 aa
MELHSVLKTVHHSHLGEEKHQMLNLNRRLETYLSRVKLLEEENVLLAQEIEALRRSNHGA
STRRKGLEEGVRQARLELDAAWRARFLTELEVGRLTEEFQALDLQRQREAQAHVKAKTML
QQSKKELEEEERAQIWLREKVSQLEHEMRHLIQTHQEDVAHLEATLTHSRATVPLTLAQR
GNQTPNLLQLDQEFSQRASRAWQEAAEAYQGQLAQVEESLNQARSRLTQVGQEKSESQLR
LQALEKEIASAQDVRLHLEKTAAQQRHKHSQEIQQLQAHLEGLEAEREELGQQIDHLLLE
NRGLLQMKMSLGLEVATYRALLDSESLRGDNSLLNQSRNISTKDAVFCPQGVKKNYQTPL
TASHKTTSLLSRRVITGTAPTVIHATACNNSYNSKPVTFNDTPKILKKPKDADTKSEAWE
TPYPKILQDGAVENFRPQEVHEKVTYAEPLSPPNEQEDFAQITSGDKEGEEECNSIHDKT
PKETPVVESFVSNQVGSGLSSEPSFNGDASHRQFTTSDLTPYDMRMTENVCVYSGESDKD
VTCEISVQKEDVQQPPALSDAGGNTECIGKAVEHVQGETSDSETDAVLEPTFESRTSSPA
SECEPGESVFNQLTDFSRDESCSNDDAVEIKQEISCSVLRTNETDVEDKLYPDGEEMDTW
DSVIERKVDLNADHGIKKDETEGQHAEPEEDISAREAEHEKREISFDVATDLQDDNVSTS
VMDTQVDDDEQHAALNQENDREDKEEEDDEEEDSQHVCVSWRTELESDSYAQDNTLADTR
PLIRYKSDETDANTQASHMEESESSEGEQEKKMGEPGSEMWNEGKSKRFGTMEDLCEEVE
GETLDKEYDLGYTHTEDRDVDHSMTVGENAASENAEEMIKNVSEGYSDEETEEFTKPMVP
TNVDYDEELETDRLVEQELENLSTDRYSAHFAQQQVSESEDMLQGESVEKMTEHEEAEKT
KSDDTSFCAESGVGVNNELESTTITDQPYENLYFSDSSVESQTDTLADEEVQHKDEDDTG
ASERREEEDEHNVSMVTHADVTGNCSGFSDFIITPDVVEVNDSEDPNAVLQENLQDDAAP
TEVKEVAPVEASKSQEHLVEDVEHQSFSDNPETAEWEVLENPSEDSEIRDQNEHDQKCDN
VPDSAEIYLHDDRGSDEVLTHKEEPLESSPDSVPDEKDIFLVKDSTELLNTHGKDNSLHS
VFSSGIKNDFWVSSLETGAAYQPDDVCNEAAEQTNQNLGFGDDLVWGNSDNPNVVNGNSR
VDTDLSKAVSSKKEQEQIHSEVKQVLCKDADEGELGHSEDSEVEVESWSSGEEAV
NT seq 3948 nt   +upstreamnt  +downstreamnt
atggagctccacagtgtacttaaaaccgtccaccacagccacctgggtgaggagaagcac
cagatgctgaacttgaaccgacgcctggagacctatctgagtcgggtcaaactcctggag
gaggaaaatgtgctgcttgcgcaggagattgaagctctgagacgcagcaatcatggagct
tcaacgcgcaggaagggcttggaggaaggggtgcggcaagcaagactggaactggatgca
gcctggagggccaggttcctcacagagctggaggttggcaggctgactgaagagtttcaa
gccctggaccttcagagacagagggaggctcaagcccacgtgaaggccaagacaatgctg
cagcaaagcaagaaggagctggaggaggaagagagggcgcagatctggctgagagagaag
gtcagtcagctggagcatgagatgaggcacctaattcaaacccatcaggaggatgtggcc
cacctggaggccacactgacccattccagagccacagtgccactcacattggctcaaaga
ggcaatcaaacaccaaaccttctacagctggatcaggagttctcccagagggcctccagg
gcatggcaagaggcagcagaggcttatcagggccagttagctcaggtagaggagtcgctt
aaccaggccaggagccgtttgacccaagtgggccaggagaagagcgaaagccagttgagg
ctccaagccctggaaaaggagatcgcctcagctcaggacgtcaggctgcatctggagaag
acggcagctcaacagagacacaaacacagccaggagatccagcaactccaggcacacttg
gaaggcctggaggcagagagagaggagctgggccagcagatcgatcatctcctcctggag
aaccggggcctgctgcagatgaagatgtctctgggcctggaggtcgcaacttacagagct
ttactggacagtgaaagcctcaggggagacaactctttgctaaatcagtcaagaaacatt
tccactaaagatgcagtgttctgtcctcagggggttaaaaagaattaccaaaccccactg
actgctagccacaagactacttcccttttatctcgccgtgttataacaggaacagcacca
acagtaattcatgcaacggcatgcaacaacagctataacagcaaacctgtaactttcaat
gacactccaaagattttaaagaaacccaaagatgcagacacaaagtcagaagcatgggaa
accccttatccaaaaatactgcaggatggtgctgttgaaaacttcagaccacaggaggtt
catgagaaagtcacctatgctgagcctctgtcacctcctaatgagcaagaggattttgct
caaatcacatcaggggacaaagaaggtgaagaggaatgcaacagcattcatgataaaact
cccaaggaaacaccagtggtggagtcatttgtcagtaatcaagttgggtctggcctgagc
agtgagccatccttcaatggtgacgcgagtcaccgccagtttacaacatccgaccttaca
ccatacgacatgagaatgacagagaatgtctgtgtctactctggtgaatctgataaggat
gtaacttgtgaaatttctgttcaaaaagaagatgtgcaacagccacctgctttaagtgat
gcagggggaaacacagagtgtataggcaaagcagtagagcatgtgcaaggggaaacctca
gattctgagactgacgcagtacttgaaccaacctttgaatccaggactagcagtccagca
tctgaatgtgagcctggagaaagtgtgtttaaccaattgacagatttcagccgagatgaa
agctgctcaaatgatgatgcagttgagataaaacaagaaataagctgttctgtgttaaga
acaaatgagacagatgttgaggataaattgtaccctgatggagaagagatggatacatgg
gatagtgtaatagagaggaaggttgatttgaatgcagaccatggaataaaaaaggatgaa
acagaaggacaacatgctgaaccagaggaagatatatcagcaagagaagcagagcatgaa
aagagagaaattagcttcgatgttgctacagatctacaagatgacaatgtgtccacttca
gtgatggacacacaagtagatgatgatgaacagcatgctgcattaaaccaagagaatgac
agagaagacaaagaagaagaagatgacgaagaggaggactctcaacatgtctgtgtgtca
tggaggacggagctggagagcgacagctacgctcaggataacactctggctgacactcgt
cctctgattcgatacaaaagtgacgagactgacgccaacactcaggcatcacacatggag
gaaagtgagtccagcgaaggcgagcaggaaaagaagatgggagaaccaggaagtgaaatg
tggaacgaaggcaagtcgaagagatttggaactatggaggatctgtgtgaagaagttgaa
ggggaaacgttggacaaggaatatgacctgggatatactcatactgaggacagggatgtt
gaccatagtatgactgtaggtgagaatgcagcatcagaaaatgcagaagaaatgatcaag
aatgtcagtgaggggtattcggatgaagaaactgaagaatttaccaaacccatggtaccc
acaaatgtagattacgatgaggagctagagacagacagactagtggagcaggagttagaa
aatctatctacagaccgctacagtgctcactttgctcaacagcaggtcagtgagagtgag
gacatgctgcagggcgagtctgtcgagaaaatgacagagcatgaagaggctgaaaaaaca
aagagcgatgacacgtctttctgtgcagagtctggagtgggggtaaacaacgaactggaa
tctactacaattacagatcagccttatgagaacctgtatttcagtgattcatcagtagag
tctcaaacagacactctggctgatgaggaggtccaacataaagatgaagatgatacaggt
gcttcagagagaagggaggaagaggacgaacacaatgtgtccatggtgacacatgccgat
gtgacaggaaattgctcaggttttagtgacttcatcatcacacctgatgtggtggaagtc
aacgactcagaggacccaaacgctgtgctacaggaaaacctgcaggatgacgctgccccc
actgaggtgaaagaggtcgcacctgtagaagcatccaagtctcaagagcatcttgttgag
gatgtagagcatcagtcattctctgataatccagaaacagctgagtgggaggtcctagag
aacccaagtgaggactctgaaatcagagatcagaatgaacatgatcaaaaatgtgataat
gtccctgactcagctgaaatttacctccatgatgacagaggctctgatgaggttctgaca
cataaagaggagcctctggagagctcccctgacagtgttcctgatgaaaaagatatcttt
ctggtgaaggattcaacagagcttctgaacacacatggcaaagacaacagcctccacagt
gttttcagctctggtataaagaatgacttctgggtgtcctccttggagactggtgccgcc
tatcaaccagatgatgtctgtaatgaagcagctgaacaaaccaatcaaaatctggggttt
ggtgacgacctagtttgggggaattcagacaaccctaatgtggttaatggaaactctaga
gttgacactgatttatctaaagccgtgtcttctaaaaaagagcaggaacagatccattct
gaggtgaagcaggtgttgtgtaaggatgctgatgagggagagttgggccattctgaggac
tctgaagttgaggttgaatcctggtcatctggggaggaagctgtataa

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