Lates calcarifer (barramundi perch): 108884737
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Entry
108884737 CDS
T04895
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04510
Focal adhesion
lcf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108884737 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108884737 (lamb2l)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
DUF745
Crescentin
Laminin_II
F5_F8_type_C
RasGEF_N_2
Oscp1
DUF948
Motif
Other DBs
NCBI-GeneID:
108884737
NCBI-ProteinID:
XP_018534326
UniProt:
A0A4W6G2B6
LinkDB
All DBs
Position
LG6:3569471..3618185
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AA seq
1841 aa
AA seq
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MTVYLSLLVLALSVFGQEQELPSGPHGCTEGSCYPATGNLLIGRAVNLTATSTCGLGGPE
PYCIVSHLQESDKCFECNSQHHYNPNHHRNSHRIENVIYLMDRNGDNTWWQSVNGQENVS
IRLNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRYFASNCTKTFPGIPANGL
RHINDIICEERYSDIEPSTNGEVIYKVLDPAIHVKDPYSLDIQELLRITNLRINFTKLNT
LGDDLLDRRSDVLQKYYYAIYELVVRGSCFCYGHASECAPVPGVNERENGMIHGRCVCKH
NTEGLNCERCRDFHNDLPWQPAEAENPHTCRECNCNSHSNQCHFDMALYLATGNVSGGVC
DDCLHNTMGHNCEMCKPFYYKDSNKDIRDPRVCVACDCDPVGSLEGGVCDSHTDSDMGMI
AGQCRCKANVKGTRCDDCKEGYYGLSQNDPLGCQPCNCDPRGIIMTGAPCDQISGDCSCK
RYVTGRYCNQCLPEYWGLSNDLAGCRPCDCDFGGAFNNRCMMENGQCDCRRHLIGRQCSE
VQPGYFCAPLDYYKYEAEDATGRSPSDPALPGKLRPQAETDCVQHLSNQLRRHRRHRRIT
NSQQHRAALRRIRQLQQTPDVRTVHREHAPSHMVTWTGPGFARVKDGAGLVFTIDNIPYA
MEYDIMIRYEPESTEDWEAIVSITSVLLPSSLRCGNLLPTEQLYTVTLPHRNRYIQMPRP
FCFEPSNRYVVAIRFQRHGVSHRHLTAFILIDSLVLIPKYTELPGFQGNEPEAEQRQEEM
IRYMCLDSFMITPMPALAEMCSKLICSISSIIHDGALPCQCDPQGSLSGECDKVGGQCRC
KPNVMGRHCDQCAPGTYGFGVNGCTACNCHPEGSLSHQCDPITGQCQCRQGATGRGCSDC
QPGQWGFPSCSPCQCNGHADLCDARTGECRDCRDYTAGHLCERCVDGFFGNPVLGSGEHC
RPCPCPGNPGSAHFNGHSCEADHSSNHIICNCRQGYAGPRCDQCTPGYYGNPEQPGGQCL
PCECNGNIDAQDPESCDPRTGQCLKCLYHTDGPSCAHCQHGYYGNALAHDCRHCTCVTAG
TIQAACSDGQCHCDRQTGACPCRENVAGHNCDQCAPNHWNYGQDGGCEPCLCDPQHALGA
HCNMFTGQCHCRPGFGGKQCTECEQFHWGDPQVQCQECNCHPLGSEMAQCNRTTGECECR
EGAAGKQCNECARGFTGVFPKCVGCHPCFQLWDDALCQIKRDLEHIQYTVQRILESGVTP
GIKDTRIRELEKKLKQVQDLISTEDSDKIHQLIGQSIDDLRAEIALTDGRLMGVARELNT
TAEEEKELNQTLNILEKELMDINRTVAYKQRLLDEYLTSGFADQFEKVKKYYKASLEAEE
KCNASVSGPLSPVEQSRNLRAITEDLLDASKDKFLRALAAQNKSLNELQQKAHDLDKKVH
HLSHKVCGGHSNASVNGSCPDSQCGGAGCRDDQGNRVCGGEGCNGTVSSSVAALNHARNV
TDSLNAANEELQDVLRKLQGIASITQDVKNQAMNTLEKAQKKKDYFENNNKKLKDFIKKI
KDFLTEEGADPESIEKVALQVLSITLPVNRTTLDKMIMQIKDSLSNLSDIEGITNQTSQH
ISKVKELLDKAKDAKQRAEEVKDAANNTRQALDESKKAIEKARTALKEANENLNSTRNAT
AEVEERLRQLEDKQMDVMMRLNNLSMGVEALRNKTEQNREMAKDAKALANNATHLASSVE
QSLNDTEKRYRELQMKVDSLGGEAGGLNTINQRAMDIKKEADNLLNKAKSGIRQLQKLEN
RFKNNEQRIQRQRVVLDQLKENATMVRDEIREQVQKYSSCL
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgtatctgagcctcctcgtgctggctctcagtgtgtttggacaggagcaggaa
ctcccatcagggcctcatggctgcacagagggaagctgttaccctgcgacaggaaacctt
ctcattggacgggctgtcaatttaactgccacctccacatgcggcctcggtgggccagag
ccctactgcattgtcagccatctgcaggagtcagacaagtgtttcgagtgtaactcccag
catcactacaacccaaaccaccacagaaacagccatcgcattgaaaacgtgatctacctc
atggacagaaatggagacaacacctggtggcagtctgtcaacggacaggagaatgtgagt
atcagactgaacctggaggctgaattccacttcacacatctcatcatgaagttcaagaca
ttcagacctgcagctatgatcatcgagcgctcagctgatttcggccgcacgtggcgcccc
taccgctactttgcctcaaactgtaccaaaaccttccctggcatccctgccaatggcctt
cgccacatcaatgacatcatctgtgaggaacgctactccgacattgaaccctccacaaat
ggagaggtaatttataaagttttggatcctgccattcatgtgaaagacccctacagcttg
gacattcaagaacttttgcgcatcaccaacctgcgtatcaactttaccaagctcaacact
ctgggagacgacctgctggaccgacgctctgatgtcttgcagaaatattactatgccatc
tatgagctggtggtcagagggagctgcttctgttacggtcatgcctcagagtgtgcccca
gtgccaggggtcaatgaacgggagaatggcatgatccacggtcgctgtgtttgcaaacat
aatacagagggcctgaactgtgaacgctgccgagatttccacaatgacctgccgtggcaa
ccagccgaggcggaaaatccacacacctgcagagagtgtaattgtaacagccactcaaac
caatgtcacttcgacatggctttatatttggccacgggtaatgtcagtggaggagtgtgt
gatgactgtctgcacaacaccatggggcacaactgtgagatgtgtaaacctttctactac
aaagacagtaataaggacatcagggacccacgggtttgtgttgcctgtgactgtgaccca
gtgggctcgttggaggggggagtgtgtgacagccacaccgactcagacatggggatgatc
gcaggacagtgtcgctgtaaagccaacgtgaaaggaacacgctgtgacgactgcaaagag
ggttactatggactcagtcagaacgacccattgggttgccagccatgcaactgtgaccct
cgtggtatcattatgacgggagctccttgtgatcagatcagtggggactgctcctgcaaa
agatatgtcactggtcgttactgcaaccagtgtctgcctgaatactgggggctcagtaat
gacctggctggctgcagaccatgtgactgtgactttggtggagccttcaacaacaggtgc
atgatggaaaatggccagtgtgactgcaggagacatctgattggccgacagtgctcagaa
gtgcagcctgggtatttctgcgctccgctggactactacaaatacgaggctgaagatgcc
actggacgctctcccagtgaccctgcactgccgggcaaactgcgtcctcaggcagagact
gactgcgttcagcacctcagcaaccagctgaggcgtcaccgccgtcaccgtcgcattacc
aactcacagcagcatcgggcagcactgagacgaatccgccagcttcaacaaacaccggat
gtgaggaccgttcacagagagcacgctcccagccacatggtgacgtggacaggacctggt
ttcgcccgcgtcaaagatggcgcaggcctagtgttcactatcgacaacatcccctacgcc
atggagtacgacatcatgatccgctatgaacccgagtccacagaggactgggaggctata
gttagtattacctcagtactgctgccctccagtcttcggtgtggaaacctcctaccaact
gaacagctctacactgtaaccctgccgcaccgcaacaggtacatccagatgcccaggcca
ttctgtttcgagcccagtaatcgatatgtggttgcaataaggtttcagcgccatggggtg
tcacacagacacctaactgccttcattctcattgactcgctggttctgatcccaaaatac
actgagcttcctggtttccaaggtaatgagccagaggcagagcagcggcaggaggaaatg
attcgctacatgtgtctggattcttttatgatcacgccgatgcctgccctggctgagatg
tgctccaaactcatctgtagtatttcatccatcattcatgatggtgctctgccctgtcag
tgtgaccctcagggttccctcagtggtgagtgcgataaggtcggaggtcagtgtcgatgt
aaacctaacgtcatgggtcgacactgtgaccagtgtgccccaggaacttatggctttgga
gtgaatggttgcactgcctgcaactgccacccagagggttcgttaagccaccagtgtgac
ccaattacaggccagtgccagtgcaggcagggagccactggacgtgggtgctcagactgc
cagccaggccagtggggcttccccagctgcagcccctgtcaatgtaacggccatgcagac
ctctgtgacgcccgcaccggggagtgtagagactgcagggactacacagcaggacatctc
tgtgaacgttgtgtggatgggttctttggaaacccggtgcttggctcaggggaacactgt
cggccctgcccctgccccggtaaccctggttcagctcactttaacggacactcttgtgaa
gctgaccacagctctaaccacatcatctgtaactgtagacaaggttatgctggacctcgc
tgtgaccagtgtacccctggttactatggtaacccagaacagcctggtggccagtgccta
ccgtgcgagtgcaatggcaacattgatgcccaggaccctgagtcatgtgaccccaggact
ggccagtgcctcaaatgcctgtatcacactgacggcccatcctgtgcccattgtcagcat
ggttactatggcaacgctttggcccacgactgtagacattgtacctgtgtaactgctggc
accatccaggctgcttgcagtgatggacagtgtcactgtgaccggcagactggagcctgc
ccttgcagggagaacgtagctggccataactgtgaccagtgtgctcctaaccactggaac
tacggtcaggacggaggctgtgagccctgtctctgcgacccacaacacgccctgggagct
cactgcaacatgttcactggccagtgtcactgtcgtccaggctttggaggtaaacagtgc
actgagtgtgagcagttccactggggagacccacaggtgcagtgtcaagagtgtaactgc
cacccgctgggctcagagatggcccagtgtaacagaacaacaggggaatgtgagtgccgg
gagggagcagcagggaagcagtgcaatgaatgtgctcgtggcttcactggtgtcttcccc
aagtgcgtgggttgtcacccgtgcttccagctgtgggatgatgcgctgtgccagatcaaa
agggacctggaacacatccagtacaccgtgcagaggatcctggagagcggggtcacgccg
ggaatcaaggacacgcgcatcagagagctggagaagaaactcaaacaggtgcaggacctg
atcagtacagaggacagcgacaagatccaccagctgattggacagagcatcgatgacctc
agggctgagattgccctgactgacggccgtctgatgggtgtagcccgagagctaaataca
acagcagaagaagaaaaggaactaaatcaaacactgaatattttggagaaggaactgatg
gacatcaacaggactgtggcttacaaacagcgcctgctggatgaatacctcacctcagga
tttgcagatcagtttgagaaagtgaagaagtactataaggcatcattggaggctgaggag
aaatgcaacgcttcagtgtccggtcctctcagtccggtggagcagtccagaaacctccgt
gctatcactgaagacctgctggatgccagtaaagacaagttcctccgtgctctggctgct
cagaacaaatcattaaacgaacttcaacagaaggcccacgacctggataagaaggtccat
cacctcagtcacaaggtatgtggtggtcacagcaatgccagtgtaaatggtagttgccca
gacagccaatgtggtggcgccggttgccgcgatgatcaaggtaatcgtgtgtgtggagga
gagggatgcaacgggacggtgagctcttctgtagcagcactgaatcatgccaggaatgtc
acagacagtctaaacgctgccaacgaggagctgcaggacgtcttaagaaagctccagggt
atagcctctatcacacaggatgtgaagaaccaggcgatgaacacgctggagaaagcccag
aaaaagaaggactactttgaaaacaacaacaagaagctcaaagatttcattaagaagatc
aaagactttctcactgaggagggagcagatccagagagcatagagaaagtggccctgcag
gtgttgtcgatcacgctgccagtcaacaggaccactctggacaaaatgatcatgcagata
aaggacagcctttccaacctctccgacatcgaggggatcaccaaccaaacctcacagcac
atcagcaaagtcaaggagctgcttgacaaagctaaagatgccaagcagcgagcagaggaa
gtgaaggatgcagccaataataccaggcaggcgttggatgagtctaagaaggccatagag
aaagcaagaacagcactgaaggaggccaacgagaatcttaacagcacaagaaatgctact
gctgaggtggaggagaggctgaggcagctggaggataaacagatggatgtcatgatgcgt
ttaaacaacctctccatgggggtggaagctctgaggaacaagacggagcagaatagagag
atggcaaaggacgccaaagccctcgctaacaatgccactcacctagcatcctcagtggag
cagagcctcaatgacacagaaaaacggtaccgtgagctgcagatgaaggtggactctctt
ggtggagaggctggaggtctgaacaccatcaaccagagggcaatggatatcaagaaggag
gcagacaacctgttaaataaagccaaaagtgggataagacaactccagaaactggagaac
aggttcaagaataatgagcaaaggatacagaggcagcgcgtggtgctggatcagctgaag
gaaaatgccactatggtgcgggatgagatccgggaacaagtgcagaagtacagcagctgt
ctgtga
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