Lates calcarifer (barramundi perch): 108884853
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Entry
108884853 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: nck-associated protein 1-like
KO
K05750
NCK-associated protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04810
Regulation of actin cytoskeleton
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108884853
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108884853
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Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
108884853
NCBI-ProteinID:
XP_018534477
UniProt:
A0AAJ7PNW1
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Position
LG12:complement(25959526..25979804)
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AA seq
1123 aa
AA seq
DB search
MDYQQKLAEKLTILNERGSGVLIRMNHIKKTCADPKQRPSILTDKGMESAVKYINKKFPN
IDFRGNIQNLTGIQRQKSEVLSATSSYYDSFLDVIEFRDHVYELLNTIDACQCFFDIAIN
FDFTKNYLDLIITYTSVIITLSRIDDKKALVGMFNCAHEMTNGCSDSSYPRLGQMFVEYE
HPWKKLTEEFGPHTRSVTSALLSLKMVYPRRNLPAEQWRGAQLLSLLSAPAAMLDPACCD
TMSCEYLSMEVMERWIIIGFMLCHSSLNSNQASLELWKMALRSSLYLTLTRDEMLNIHKV
TEDLFDGFKGYSKRVADIKECREHVIVNCGAMHRERRQFLRGALKELFNVLEDEPGLLGP
KALFVIMALSFSRDEVLWLVRHSENMPKIKTPEDYVDNQMAELLFYMQKLRGLMRKYNHV
LQRYHVQYLAQFDALVLNDTIQNMYVCPEEESVLMSSFVSTLSGLSIKQVENKEEFDFRA
LRLDWLRLQAYTSVNKAPLPLKDYPDLAKVMNLIQFHTRMVDSVEEVLQETSDLSIFCFY
PRVFEKMFNQSQDEMTMKRYLMSFPSVCSHFSQCGHPLCPEEIEVMEKRSLRLCVTFLEQ
IAKQTSNIVLEICAEQCNLNEQLLPKHCAENISAARHRKQKKPVPKKGEVQKEKPGAESL
RKDRTVATNVDKMHLTLTELCSSYSLCNDLIVFDHIVVPTEFLLSHLETRLSEIIVRMAN
YNQTTQEIARPSDLLAGIRVYTATLHSLSSYINVDVTRLVKNVLLQQTQPLDSRGGATIT
NIYTNWFLECLLRQASNSLIVHCPTMHCFINQTIDSEPSFRAEEFSDISELRALAELIGP
YGLKFLSENLMWHITSQVSELKKLVIENMDILVQMRSHFDKPEEMANLKKRLTGGENVLK
RMTIIGVILSFKSMAQDCLKDILQKHCPYLMGPIKCLRDFISPEADIKVTLSVFELASAA
GLTCDIDPALVTAIRSMQTDNISVDEEYKLTCLLLVYIAVSLPALALDNNSSYSREHGGH
NNNIHCLAKAINQLAAAMFTVQNKNIEQHLKDFLLTASSTLLQLGQNVERVEVKNRESIY
LLLHMIVEESPFLSQDMLESCFPYVLLRNAYREVYRSFIVTLG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggactaccaacagaaactggccgaaaagctcaccatcctcaatgagagagggagtggg
gtcctgatacgcatgaaccacattaagaagacctgtgcagaccctaagcagcggccgtcc
atcctcacagataaaggcatggagtccgccgtcaagtacatcaacaagaaattccccaac
atcgacttcagagggaacattcaaaatctgacgggcatccagcgacagaaatctgaagtg
ctgtcagccacatcgagctactacgactctttcctggatgtcatagagttcagggaccat
gtgtatgagttgctgaacactatagacgcctgtcagtgcttctttgatattgccatcaac
tttgacttcaccaagaactacttggatctgatcatcacctacacctctgttatcataacg
ctctctcgcatcgatgacaagaaggctctggtgggcatgttcaactgtgctcatgaaatg
accaacgggtgcagcgactcctcctacccgcggctcggccagatgtttgtggagtacgag
catccgtggaagaagctcacggaggagtttggccctcacacacggtctgtgacatcagca
ttgctgtctctgaagatggtctacccacgcaggaacctgccagccgagcagtggcggggc
gcccagctcctcagtctgctcagtgctccagctgccatgctggacccggcctgctgcgac
accatgtcatgcgaatacttgtctatggaggtaatggagcgatggatcattatcggcttc
atgttgtgccacagcagcctgaattccaaccaggcctctctggagctgtggaagatggct
ctgcggagcagcctctacctcaccctcaccagagacgaaatgctcaacatacacaaagtc
acagaggacctcttcgacggcttcaaaggatacagcaagcgagtcgcagacatcaaagag
tgccgtgagcacgtcatagtcaactgcggagcgatgcacagagagaggaggcagttcctg
agaggagcactgaaggaattattcaatgtcctggaggatgaacctggactcctgggacca
aaggccctgtttgtcatcatggctctgtcgttttcccgtgacgaggtcctgtggctcgtc
agacactctgagaatatgccaaagataaagacgcccgaggactacgttgacaatcagatg
gcagagttgctcttctacatgcagaagctgagaggcctcatgagaaaatacaaccatgtg
ctacagcgctaccatgtccagtacttggcacagtttgatgccttggttctcaatgacacc
atacagaacatgtacgtgtgtccagaggaggagtcggtcctgatgagttcattcgtctca
accctgtctggtctctcaatcaaacaagtggaaaacaaagaggagtttgatttccgagcg
ctcagactggactggctgagattacaggcctacacaagtgtgaacaaggctcctcttccg
ctaaaggattaccccgacttagcaaaggtgatgaacttgatccagtttcacaccaggatg
gtggacagtgtggaggaggtgctgcaggagacatctgacctgtccatattctgcttctac
ccgcgtgtctttgagaagatgtttaaccagagtcaggatgaaatgaccatgaagcgttac
ctcatgtccttcccgtccgtctgttcccacttcagtcagtgtggtcaccctctctgccca
gaagagatagaagtaatggagaagaggagtctgcgcctgtgtgtgaccttcctggagcag
atagccaaacagaccagtaacattgtgttagagatatgtgctgagcagtgtaacctcaat
gaacagctgctgcccaaacactgtgccgagaacatcagcgccgctcgccacagaaagcaa
aaaaagccggtgccaaagaaaggagaggtccagaaagagaaaccaggcgccgaaagcctg
aggaaagaccggaccgtcgccaccaatgttgacaagatgcatctgacgctgacggagctc
tgctcctcctacagtctctgcaacgacctcatcgtcttcgaccacatcgtcgtccctaca
gagttcctcctttctcacctggagacacgcctctctgagatcatcgtgagaatggccaat
tacaaccagaccacccaggagatagcccgtccctcggacctcctggcagggataagagtc
tatacagccactctgcacagcctctccagctacatcaacgtggacgtcacccggctggtg
aagaacgtcctgctgcagcagacacagccgctggactcacgtgggggggcgaccattacg
aacatctacacaaactggttcctcgagtgtctcctgcgtcaggccagcaactccctcatc
gtccactgtccgaccatgcactgcttcatcaaccagaccattgacagtgagccaagtttc
agagctgaggagttctcagacatatcagagctgcgggccctggcggagctgattggtcca
tatggcctgaagtttctgagtgagaacctgatgtggcacatcacctctcaagtcagtgag
ctgaagaaactggtgattgagaacatggacatcctggtacagatgaggagccactttgat
aaaccggaggaaatggccaatcttaaaaagaggctgacaggtggagagaacgtgctgaag
aggatgaccatcatcggagtgatcctgtccttcaaatccatggcacaggactgtctgaaa
gacatcctgcagaagcattgtccgtacctgatggggcccatcaagtgcctgagagatttc
atctcccctgaagctgacatcaaggtgactctgagtgtttttgagttggcgtctgctgca
ggcctgacatgtgatatcgatcctgccctggtcacagcgatccgcagcatgcagacagat
aacatatccgttgacgaagagtacaagctgacctgtttgctgctcgtctacatcgccgtg
tccctgcctgccttggccctggacaacaactcgtcctacagccgagagcatggaggccac
aacaacaacatccactgtttagctaaagctatcaaccagctggctgctgccatgttcact
gttcagaacaagaacatagagcaacacctcaaagattttctcctgacggcctcctccact
ctgctgcagctgggacaaaatgtagagagagtggaggtcaaaaaccgagagtccatctac
ctgctcctgcacatgattgtggaggagtctccgttcttgagccaggacatgctggagagc
tgcttcccgtacgttctgctccgaaacgcctacagagaggtgtacaggtctttcatcgtc
actttgggctga
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