Lates calcarifer (barramundi perch): 108884925
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Entry
108884925 CDS
T04895
Name
(RefSeq) transcriptional activator Myb isoform X1
KO
K09420
transcriptional activator Myb
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108884925
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
108884925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Cmyb_C
Myb_DNA-bind_7
Spore_III_AB
DUF7154
Motif
Other DBs
NCBI-GeneID:
108884925
NCBI-ProteinID:
XP_018534532
UniProt:
A0AAJ7PNZ7
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Position
LG4:complement(450693..455665)
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AA seq
586 aa
AA seq
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MSSRSRRSCTKRRSCLGRKGLEGRFSRGSLQKPGWTKDEDERLQRLVKEFGSNSWSSVSL
HFKGQRSDVDCQRRWQQIKNPELVKGPWTQEEDERVIELVQKYGVKHWSLIAKHLHSRNG
KQCRERWHNHLNPTVKKSSWTLEEDRIICQAHRLLGNRWANISKLLPGRTDNSIKNHWNS
TLKRKVEKQGYLQVLHLHNSSITSSTFNSSSNSSSSSSSSRPASRSCAPPSSANLPTKGH
SLSTVKDESSCTSSEQSARRHHRSHGYLCPACVPASSSGYDSSLSMCELTAPVELMEATS
DTWSHSPKEVTSSLPTCQYREDVDPSVIDLSHSYVAGVKEQLINSEDGASSCSRASLVGA
LSLSPSELFSLCGVEDLKLQGPALTSTPVCSLKHSTNTQDDSCLHCTYTFNTQTPTEIRE
RIRALWTSAPQTPTPLKTSHTCQDQVSVSSSRMMNVTWEDRSVDPDSQQSSSSSEVQGES
LLSSILQVQAESGSVQQQVQEESSSASEVHRESSSVPGCEEFGCFPLDGQVEVWWCQQPL
GYLHSPECPAYRLNPFELSGELQVVMFGKTDDQLSLTEQARLYVEP
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaggagccgcaggtcctgcactaagaggcgctcctgtctgggacgtaaagga
ctggagggacgattctccagagggagtctacagaagcctggatggacaaaagacgaggat
gagaggctgcagagactggtgaaggagtttggatcaaacagctggtcttcagtttccctt
catttcaaaggtcaaaggtcagatgtggactgtcagcggaggtggcagcagataaagaat
ccagagctggtgaaaggtccctggactcaggaggaggatgagagggtgatcgagctggtc
cagaagtacggcgtgaagcactggtcgctcatcgccaaacacctgcacagtcgcaatggg
aagcagtgccgcgagcgctggcacaaccacctgaacccgacagtgaaaaagagcagctgg
actctggaggaggaccgcatcatctgtcaggcccacaggctgctgggaaaccgctgggcc
aacatctccaagctgctgcccggcaggactgataactccatcaaaaaccactggaactcc
accctgaagaggaaggtggagaagcagggatacctgcaggtcctgcacctgcacaactcc
tccatcacctcctccaccttcaactcctcctccaactcctccagctcctcctcctcctcc
agacctgcatccaggtcctgcgccccccccagctcagccaaccttcccaccaagggtcac
agtctgtccactgtgaaggacgagtccagctgcacctccagtgaacagagcgcgcgcaga
caccatcgtagccacggctacctgtgccccgcctgcgtccctgcctcctcctcaggttac
gactcctctctgagcatgtgcgagctgacagcacctgtggagctgatggaggcgacctca
gacacctggagccacagcccaaaggaagtgacatcatcacttcccacctgtcagtacaga
gaggacgtcgacccttcggtcatcgacctgagccacagctacgttgcaggtgtgaaggag
cagctgatcaacagtgaggacggagcctcttcctgcagcagagccagtctggttggagct
ctgagcctctctccctctgagctcttcagtctctgtggtgtcgaggatctgaagctgcag
ggtccggctctcacctccaccccggtctgctccctcaaacactccaccaacacccaggac
gactcctgtctgcactgcacctacaccttcaacacccagaccccgacagagatcagagag
aggatcagagctctgtggacgtctgctcctcaaacaccaacaccactgaagaccagccac
acctgtcaggaccaggtctcggtgagttcgagcaggatgatgaatgtgacgtgggaggac
aggagcgtggatcctgacagtcaacagtccagcagcagctccgaggtccagggggagagt
ctgctgagctccatcctgcaggtccaggcagagtctggctcagtccagcagcaggttcag
gaggagtccagctcggcctcagaggtccacagagagtccagctcggtcccgggctgtgag
gagtttggctgtttccctctggacggacaggtggaggtgtggtggtgtcagcagcccctc
ggttacctgcactctcctgagtgtcccgcctacagactcaaccccttcgagctgagcggc
gagctgcaggtggtgatgtttgggaaaacagacgatcagctgagtctgaccgagcaggcc
cgactctacgtggagccctga
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