Lates calcarifer (barramundi perch): 108884943
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Entry
108884943 CDS
T04895
Name
(RefSeq) citrate synthase, mitochondrial
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00020
Citrate cycle (TCA cycle)
lcf00630
Glyoxylate and dicarboxylate metabolism
lcf01100
Metabolic pathways
lcf01200
Carbon metabolism
lcf01210
2-Oxocarboxylic acid metabolism
lcf01230
Biosynthesis of amino acids
Module
lcf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lcf_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
108884943
00630 Glyoxylate and dicarboxylate metabolism
108884943
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
108884943
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
PAS_3
Motif
Other DBs
NCBI-GeneID:
108884943
NCBI-ProteinID:
XP_018534630
UniProt:
F8SLH1
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Position
LG6:complement(22231478..22243717)
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AA seq
469 aa
AA seq
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MSFLTISRLAPKLLNSKNATYFLVAARNASASTTNLKDVLADLIPKEQTRIKNFKQQYGK
TNIGQITVDMVYGGMRGMKGLVYETSVLDPEEGIRFRGYSIPECQKLLPKAPGGEEPLPE
GLFWLLVTGQVPTEEQVNWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQFSAAITALNS
ESSFARAYSEGVHKSKYWEFVYEDSMDLIAKLPCIAAKIYRNLYREGSSIGAIDSNLDWS
HNFTNMLGYSEPQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFSAAMNGLA
GPLHGLANQEVLVWLTALQKELGGEVSDERMRDYIWNTLKSGRVVPGYGHAVLRKTDPRY
TCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEM
NYYTVLFGVSRALGVLAQLVWSRALGFPLERPKSMSTDGLMTLVGAKSG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttctcactatcagcaggctagcgcctaaactcctcaattcaaagaatgccacc
tactttcttgtggctgccagaaatgccagcgcatcaacaacaaatctgaaggatgttctg
gcagaccttatccctaaagaacagaccaggatcaagaactttaaacaacagtatggcaaa
accaacataggacagattactgttgacatggtctatggaggtatgaggggaatgaagggt
ctggtgtacgagacctctgttttggatcctgaggagggaatccgttttaggggctacagc
attccagagtgtcagaagttgctgcctaaagctccaggaggtgaggagccgctgcctgag
ggtctcttctggctgctggtcacagggcaggtgcccactgaggagcaggtgaactgggtg
tccaaagagtgggcaaagagagcagcacttccctctcatgttgtcaccatgttggataat
ttccccacaaacctgcaccccatgtctcagttcagtgctgccatcacagctctgaacagc
gagagcagctttgcacgggcttactctgagggtgtccacaagtccaagtactgggagttt
gtctatgaagactccatggacttgattgccaagttgccctgcattgctgccaagatctac
cgcaacctgtaccgcgaaggcagcagcatcggagccatcgactccaacctggactggtcc
cacaacttcactaacatgctgggctacagtgaaccccagttcactgagctaatgaggctc
tacctcaccatccacagcgatcacgaaggaggcaatgtcagtgcccacaccagccacctg
gtgggtagtgccctgtctgacccctacctgtccttcagcgccgccatgaacggtctggct
ggtcctctgcacggcctggccaatcaggaggtgctggtgtggctcaccgcgctgcagaag
gagctgggaggagaggtgtctgatgagaggatgagggattacatctggaacacactcaag
tctggaagggttgtgccaggctatggccatgctgtcctgaggaagactgaccctcgttac
acctgccagcgtgaatttgccctgaaacatctccccaacgaccccatgttcaagttggtt
gcccagctttacaagattgtgcccaatgtgctcctggagcagggtaaggccaagaacccc
tggcccaacgtggatgctcacagtggagtgctgctgcagtattatggaatgactgagatg
aattactacactgtgctctttggtgtgtcccgagccctcggtgtgctggctcagctggtg
tggagtagagccttgggcttccccttggagcgccccaagtccatgagcacagatggactg
atgacactggtgggagccaagtcaggctga
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