Lates calcarifer (barramundi perch): 108884948
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Entry
108884948 CDS
T04895
Symbol
si:dkey-181m9.8
Name
(RefSeq) E3 ubiquitin-protein ligase lubel isoform X1
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04217
Necroptosis
lcf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108884948 (si:dkey-181m9.8)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108884948 (si:dkey-181m9.8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108884948 (si:dkey-181m9.8)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108884948 (si:dkey-181m9.8)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108884948 (si:dkey-181m9.8)
Multi subunit type E3
LUBAC complex
108884948 (si:dkey-181m9.8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
E3_UbLigase_RBR
IBR_1
IBR
Motif
Other DBs
NCBI-GeneID:
108884948
NCBI-ProteinID:
XP_018534594
UniProt:
A0AAJ7PP18
LinkDB
All DBs
Position
LG4:complement(234097..242163)
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AA seq
827 aa
AA seq
DB search
MPRVGAKEELRTLVECQYSYPAETLSDLHKVRALFSDLRLYVDFYCFPNKEKKRLVYLAG
TIPVHYEGSEYNIPVCIWLHETHPVSRPCCYVCPSISMAINPSCPCVDTSGNISLDGLRN
WTHGVSNLSLLVSEMRQAFQVDTPLYARCPAQAPPPTGVQVSPSATEGRSESSVSSCSHH
HISSISSSPQSSRLPLTSSYLSGQKASQWEASREVRVRRSYTEELLGIDFSAPPPSSSSS
SSSSSNHYNPFLSSSSPGPPPKPLSRMMGALSLDGGASGDQQDDSPVQIVQSEAARDRHR
LGSGPAPELHQDQGTRFQSEPAAGADHIKMAARLSPDRAAIFFSLMKMKGRSFSPSDVME
AVQLNKDLPSALRFLTHSCPICQDQVTFSKIITMTHCSCFLCQTCFKTFFSAAIKERSID
QLVCPQCGRPEVRGQGRMEESMDYFNLLDTQIRHFLPAQLHELFQRKLRDRALQEMPNFC
WCAHCSFGMLHEADRLRMDCPSCKKSTCSQCRSPWSPQHQGLSCEQFRVWQQQNHPDHST
ALLSYNSIECPNCQFIFILSKGGCLHFTCSQCQYQFCGGCSQTFTLGAVSLWSASTGLYY
QGLLSGSTVSFCGRVLLSASIVRVYCQGLLSTTLSVEVCGFSADCGTKGLHAHHPRDCLY
HLRDWSVTRLHLLLQFYRVSPSWLEPAKGSSPDTSGTGVCLVLELRDDGSRREEPCGQPA
LPEYRGYCQLHYKERLVELINRCRADPAVLFSPAEMMVELQRWHIAVPTRKPDESEQLYA
QRLRLTLTNRVPLRKQRRSPLKLNDDLCPLTSAVAAGAPPPHLLLTD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagtcggagctaaggaggagctgcggactctggtggagtgtcagtacagttac
cccgcagagactctgtctgatcttcacaaggttcgagctcttttctctgatcttcgtctc
tatgtggatttttactgttttccaaacaaagagaagaagaggctggtttacctggctggg
acgattcctgttcactatgaaggaagtgagtataatatcccagtgtgcatttggcttcat
gagacacacccagtgtcccgtccttgctgttacgtctgcccgtccatctccatggcgatc
aacccatcctgtccctgcgtggacacttctggcaacatcagtctggacggactgaggaac
tggacccatggtgtgtccaatctatcgctgcttgtgtcagaaatgaggcaggccttccag
gtggacacgcccctctatgccaggtgtcctgcccaagctccacccccaacaggtgtgcag
gtgtcaccgtcagcgacagagggaaggtcagagagttctgtgtcctcctgcagccaccac
cacatctcctccatctcctcctccccacagagcagtcgtctccctctcacctcctcctac
ctgtctggacagaaagccagccaatgggaggcgagtagggaggtgagggtgaggaggtcg
tacacagaggagctgctggggatcgacttcagtgctcctcctccctcctcctcctcctcc
tcctcctcctcctccaaccactacaaccccttcctaagctcctcctccccaggtccccct
ccaaaacccctcagcagaatgatgggggctctgagtctggatgggggggccagtggagac
cagcaggatgactcacctgtacagatcgtccaatcagaagcagccagagacagacacaga
ctgggttctggaccagcacctgaactacatcaggaccagggtacaagatttcagagtgaa
ccagcagccggagctgaccacatcaagatggcagcccgtctctccccggaccgggcggcc
atcttcttctcgctcatgaagatgaaggggcggagcttcagccccagtgatgtcatggag
gcggtccaactcaacaaagatctcccatcagccctcaggttcctgacccacagctgtccc
atctgtcaggaccaggtgaccttcagcaagatcatcaccatgactcactgctcctgcttc
ctgtgtcagacgtgttttaaaacatttttctctgcagccattaaagagcgaagcatcgat
cagctggtttgtcctcagtgtggccgacctgaggtcagaggtcagggacggatggaggag
tccatggactacttcaacctgctggacactcagatccgtcacttcctgcctgctcagctc
catgagctgttccagaggaaactcagagaccgagctctgcaggagatgcccaacttctgc
tggtgtgctcactgttcgttcggcatgcttcatgaagctgaccggctgaggatggactgt
cccagctgtaagaagagcacctgttctcagtgcagatcaccttggtcccctcagcatcag
ggtctgtcctgtgagcagttcagagtctggcagcagcagaatcatccggaccacagcact
gccctgctcagctacaacagcattgagtgtccaaactgtcagttcatcttcattctgtcc
aaaggaggctgtctccacttcacctgcagccagtgtcagtatcagttctgtggaggctgc
agtcagaccttcaccctgggagccgtgagtctgtggtctgcttctactggcctctactat
cagggtcttttgtcaggttctactgtcagcttctgcggtcgggttctactgtcagcttct
attgttagggtctactgtcagggtctgctgtctaccactctgtcagtggaggtctgtggt
ttctctgctgactgtggaaccaaaggtcttcatgcccaccaccccagagactgcctgtac
cacctgagggactggagcgtgacccgcctacacctgctgctacagttttacagagtgtct
ccctcctggttggaaccagccaaaggtagctcacctgacaccagtgggacaggagtgtgt
ttggttttggagctgagagacgacggcagcagaagagaggagccctgtggacaacctgca
cttcctgagtacagaggatactgccagttgcactataaggagcgattggtggagttgatc
aaccgttgccgtgctgacccagcagtcctcttcagtccggcagagatgatggtggagctg
cagcgttggcacattgccgtgccgaccagaaaacccgatgaatcggagcagctgtatgcc
cagcgcctccgcctgactctgaccaatagagttcctctgaggaagcagcgacgctctcca
ctcaagctcaacgatgacctctgccctctgacctctgctgtggctgctggagctccgccc
cctcacctgctgctgacagactga
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