KEGG   Lates calcarifer (barramundi perch): 108884950
Entry
108884950         CDS       T04895                                 
Name
(RefSeq) amphiphysin isoform X1
  KO
K12562  amphiphysin
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108884950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108884950
Membrane trafficking [BR:lcf04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    108884950
  Bin/Amphiphysin/Rvs (BAR) family proteins
   N-BAR proteins
    108884950
 Others
  Actin-binding proteins
   Nucleation-promoting factors (NPFs)
    108884950
SSDB
Motif
Pfam: BAR SH3_9 SH3_1 SH3_2 HD_3 BAR_3 PRP1_N
Other DBs
NCBI-GeneID: 108884950
NCBI-ProteinID: XP_018534607
UniProt: A0AAJ7LXE7
LinkDB
Position
LG4:complement(200043..231520)
AA seq 753 aa
MAEIKTGIFAKNVQKRLNRAQEKVLQKLGKADETKDEQFEQVVINFRRQESEGSRLQREM
KAYMSAIKGMQQASINLTQSLHEVYEPDWHGKDDVMTIGKDCDALWEDFHNKLVDSTLLN
LDAYLQQFPDLKTRVAKRSRKLIDYDSARHHVETLQASGIKNDRKMMKAEEELKKAQRVF
DELNVGLQDELPTLWDSRVGFYIRTYKSVTSLEAKFHREISLVCRQLYEVMTKLGEQHSD
KMFTIQGAPSDSGPLRLARTPSPPEDESPPESPDASSNHMLRPVSPGPPRPKSPTQFKKG
PPVPPPPKVTPTKEVAEEQIIDLFGGEFLPAPSPSQPNERPGESLLDLDFDAFQPDESVS
PIPQTAVPWDMWSANAQTAQPQAADSGFIADWSADFGSVSANGDASSRAEAPDAPGAPAV
GLEGVQGGAQGVAQGWPQADGWQPGGDTATAPQDSEAAATTEDEVTSAFNGFSQDASASS
FFADFDKMNEVNAESTEAPEASEIQAVEEQNKSATSPPAGDEPIASPPGGEVDEHPAPPA
GEVEEPVASPAGEVEEPASPPAGEVEDPATTPAGEEHTAESSSSPKEEKPASVGSPSSEK
PELGETPPAEEAKTFPGEAAPSEKMPIPSVVIEPASSNEGDDDRDADIISPTTISDNGVT
AQNQSVKHMSPSGGVSGLPDDFLYKVETMHDFEAANSDELELKRGDVVLVVPTASVEDQD
AGWLTGIKEHDWLTLGASAQKGLFPENFTQRLE
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggcggaaatcaaaacgggaatcttcgctaaaaacgtgcagaaacgtctgaaccgggcg
caggagaaggtgctgcagaagctgggaaaagcagatgagaccaaagatgaacagtttgaa
caagtggtcattaacttcaggagacaagagtctgaaggctctcggctgcagagggagatg
aaggcctacatgtctgctattaaagggatgcagcaggcctccatcaacctgacccaatct
ctacatgaagtttatgaaccagactggcatggaaaagatgacgtcatgaccattgggaag
gactgtgatgcactgtgggaagactttcataacaaactggtggactcaacgctgctgaac
ctggatgcgtacctgcaacagttcccagatctcaagactcgtgtggccaagagaagtcgg
aaactcattgattacgacagtgctcgtcaccacgtagaaactctgcaggcgtctgggatc
aagaatgaccgcaagatgatgaaggcagaggaagagctgaaaaaagcccagagggtgttt
gatgagttgaacgtgggtctgcaagatgaactgccgactctctgggatagccgggtcggc
ttctacatcagaacctacaagagtgtgacaagtctggaggcaaagtttcacagagagatt
tctttggtgtgcaggcagctgtatgaagtgatgaccaaactgggtgagcagcactccgac
aaaatgttcaccatccaaggagcacccagtgattcaggaccactacgacttgcgaggacc
ccgtcaccaccggaagacgagagtccacctgagagtccagatgctagctccaatcatatg
ctccgtcctgtctcacctggaccaccacgacccaagtcccccacacagtttaaaaaggga
ccaccggtgcctccaccaccaaaggtcacacctaccaaggaggtggcagaggagcaaatc
attgacctctttggaggagaatttttaccggcaccttcaccatcacagcccaatgaacga
ccaggagaatctcttcttgatctggactttgatgcttttcagccagatgaaagtgtttca
ccaataccacagacagctgtaccttgggatatgtggtcggcaaatgcccaaacagctcag
cctcaggctgcagactctggcttcatcgctgactggtccgcagactttggttcagtgtca
gcaaatggagatgcctcttcaagagccgaggcccctgatgcccctggggcccctgctgta
ggcctggaaggggtgcagggtggggcacagggtgtggctcagggctggccccaggcagat
ggttggcagccaggtggagacacagctacagctccccaggacagcgaggcagccgcaaca
actgaagatgaggtgaccagtgcatttaatggattttcacaggatgcttccgcctcatca
ttttttgctgattttgataagatgaacgaagttaatgctgaatcaactgaggctcctgaa
gcctcagagatacaagctgtcgaggaacaaaacaaatctgcaacctccccccctgctgga
gacgaacctatagcctcccctcctggaggagaggtggatgaacatccagctccacctgct
ggtgaggtggaagaacctgtagcttcccctgctggtgaggtggaggagcctgcatctcca
cctgctggtgaggtagaggatcctgcaactacccctgctggtgaggaacatacagcagaa
agttctagcagcccaaaggaagagaagcctgcttcggttggatctcccagctctgagaag
ccagaactcggagagactcctcctgctgaagaagccaaaacattcccaggagaagcagcc
ccatcagaaaagatgccgatcccttctgtggtgattgaacctgcctccagtaatgaaggg
gatgatgaccgtgatgctgacattatctctcccaccaccatcagtgacaatggtgtgacg
gctcaaaaccagtctgtcaaacacatgagtccgtctggtggagtgtcaggactccctgat
gactttctctacaaggtggagacgatgcatgactttgaggcagcaaattcagatgagctt
gaactgaagagaggtgatgtggtattggtggttccgactgcctcagtagaggatcaggat
gccggttggctcacagggatcaaagaacatgactggttaaccctaggagccagtgctcaa
aaaggactgttcccagaaaacttcacccagcgtttggagtaa

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