Lates calcarifer (barramundi perch): 108884950
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Entry
108884950 CDS
T04895
Name
(RefSeq) amphiphysin isoform X1
KO
K12562
amphiphysin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108884950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108884950
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108884950
Bin/Amphiphysin/Rvs (BAR) family proteins
N-BAR proteins
108884950
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108884950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
SH3_9
SH3_1
SH3_2
HD_3
BAR_3
PRP1_N
Motif
Other DBs
NCBI-GeneID:
108884950
NCBI-ProteinID:
XP_018534607
UniProt:
A0AAJ7LXE7
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Position
LG4:complement(200043..231520)
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AA seq
753 aa
AA seq
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MAEIKTGIFAKNVQKRLNRAQEKVLQKLGKADETKDEQFEQVVINFRRQESEGSRLQREM
KAYMSAIKGMQQASINLTQSLHEVYEPDWHGKDDVMTIGKDCDALWEDFHNKLVDSTLLN
LDAYLQQFPDLKTRVAKRSRKLIDYDSARHHVETLQASGIKNDRKMMKAEEELKKAQRVF
DELNVGLQDELPTLWDSRVGFYIRTYKSVTSLEAKFHREISLVCRQLYEVMTKLGEQHSD
KMFTIQGAPSDSGPLRLARTPSPPEDESPPESPDASSNHMLRPVSPGPPRPKSPTQFKKG
PPVPPPPKVTPTKEVAEEQIIDLFGGEFLPAPSPSQPNERPGESLLDLDFDAFQPDESVS
PIPQTAVPWDMWSANAQTAQPQAADSGFIADWSADFGSVSANGDASSRAEAPDAPGAPAV
GLEGVQGGAQGVAQGWPQADGWQPGGDTATAPQDSEAAATTEDEVTSAFNGFSQDASASS
FFADFDKMNEVNAESTEAPEASEIQAVEEQNKSATSPPAGDEPIASPPGGEVDEHPAPPA
GEVEEPVASPAGEVEEPASPPAGEVEDPATTPAGEEHTAESSSSPKEEKPASVGSPSSEK
PELGETPPAEEAKTFPGEAAPSEKMPIPSVVIEPASSNEGDDDRDADIISPTTISDNGVT
AQNQSVKHMSPSGGVSGLPDDFLYKVETMHDFEAANSDELELKRGDVVLVVPTASVEDQD
AGWLTGIKEHDWLTLGASAQKGLFPENFTQRLE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatcaaaacgggaatcttcgctaaaaacgtgcagaaacgtctgaaccgggcg
caggagaaggtgctgcagaagctgggaaaagcagatgagaccaaagatgaacagtttgaa
caagtggtcattaacttcaggagacaagagtctgaaggctctcggctgcagagggagatg
aaggcctacatgtctgctattaaagggatgcagcaggcctccatcaacctgacccaatct
ctacatgaagtttatgaaccagactggcatggaaaagatgacgtcatgaccattgggaag
gactgtgatgcactgtgggaagactttcataacaaactggtggactcaacgctgctgaac
ctggatgcgtacctgcaacagttcccagatctcaagactcgtgtggccaagagaagtcgg
aaactcattgattacgacagtgctcgtcaccacgtagaaactctgcaggcgtctgggatc
aagaatgaccgcaagatgatgaaggcagaggaagagctgaaaaaagcccagagggtgttt
gatgagttgaacgtgggtctgcaagatgaactgccgactctctgggatagccgggtcggc
ttctacatcagaacctacaagagtgtgacaagtctggaggcaaagtttcacagagagatt
tctttggtgtgcaggcagctgtatgaagtgatgaccaaactgggtgagcagcactccgac
aaaatgttcaccatccaaggagcacccagtgattcaggaccactacgacttgcgaggacc
ccgtcaccaccggaagacgagagtccacctgagagtccagatgctagctccaatcatatg
ctccgtcctgtctcacctggaccaccacgacccaagtcccccacacagtttaaaaaggga
ccaccggtgcctccaccaccaaaggtcacacctaccaaggaggtggcagaggagcaaatc
attgacctctttggaggagaatttttaccggcaccttcaccatcacagcccaatgaacga
ccaggagaatctcttcttgatctggactttgatgcttttcagccagatgaaagtgtttca
ccaataccacagacagctgtaccttgggatatgtggtcggcaaatgcccaaacagctcag
cctcaggctgcagactctggcttcatcgctgactggtccgcagactttggttcagtgtca
gcaaatggagatgcctcttcaagagccgaggcccctgatgcccctggggcccctgctgta
ggcctggaaggggtgcagggtggggcacagggtgtggctcagggctggccccaggcagat
ggttggcagccaggtggagacacagctacagctccccaggacagcgaggcagccgcaaca
actgaagatgaggtgaccagtgcatttaatggattttcacaggatgcttccgcctcatca
ttttttgctgattttgataagatgaacgaagttaatgctgaatcaactgaggctcctgaa
gcctcagagatacaagctgtcgaggaacaaaacaaatctgcaacctccccccctgctgga
gacgaacctatagcctcccctcctggaggagaggtggatgaacatccagctccacctgct
ggtgaggtggaagaacctgtagcttcccctgctggtgaggtggaggagcctgcatctcca
cctgctggtgaggtagaggatcctgcaactacccctgctggtgaggaacatacagcagaa
agttctagcagcccaaaggaagagaagcctgcttcggttggatctcccagctctgagaag
ccagaactcggagagactcctcctgctgaagaagccaaaacattcccaggagaagcagcc
ccatcagaaaagatgccgatcccttctgtggtgattgaacctgcctccagtaatgaaggg
gatgatgaccgtgatgctgacattatctctcccaccaccatcagtgacaatggtgtgacg
gctcaaaaccagtctgtcaaacacatgagtccgtctggtggagtgtcaggactccctgat
gactttctctacaaggtggagacgatgcatgactttgaggcagcaaattcagatgagctt
gaactgaagagaggtgatgtggtattggtggttccgactgcctcagtagaggatcaggat
gccggttggctcacagggatcaaagaacatgactggttaaccctaggagccagtgctcaa
aaaggactgttcccagaaaacttcacccagcgtttggagtaa
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