Lates calcarifer (barramundi perch): 108884990
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Entry
108884990 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: nebulette
KO
K25865
nebulette
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108884990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108884990
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108884990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nebulin
SH3_9
DUF668
SH3_1
SH3_2
Peptidase_S8_N
Motif
Other DBs
NCBI-GeneID:
108884990
NCBI-ProteinID:
XP_050922894
UniProt:
A0AAJ8AY64
LinkDB
All DBs
Position
LG24:19483048..19499836
Genome browser
AA seq
1506 aa
AA seq
DB search
MAETLETQHAKQASQIQSQVKYKEDVQKDLSSALFSSLPQTLQTELAKEVTELQSQVKYK
EGCKKEAASSLYRLLPETPEMHFAKQMSEIQSEVQLFSDRSLKAFSLLSLSAVFLKCLVI
CSSLKAKYKKDKEDLPVTLHSLLPETLQTQFVKEMAETHSEVKYKQAGKQQAASLYSKLP
ETLETKHAKEVTELQSEKKYKDEGRKEMTSSLYSQLPETAETQFAREMTEIQSENKYKES
GKRSQTVCVYSQLPETNEIQFAKAVSEIQSETKYKEAGKKEVSSCLYSKLPETLDTLHAK
EVSQLQSQVKYKQESKKEARGSLYHQLPETTETQQAKELRDLYSEVKYKEEGKKEISKNL
YSLLPETPETQFAKQMSEIQSEATYKKDKEDLPVTLYSLLPETLQTQFVKEMAETHSEVK
YKEAGRKEASSALYHRLPETLETQRVREVTELQSENKYKESGKKSMSSSLYAQLPQTAET
QLAAKMSELHSESKYKEDGMKSLSQSFYSQLPETAETQFARAVSELQSEAKYKEASRKET
TSCLYHQLPETLDTQHAKEATELQSQVKYREGKKELSTNLYCLLPETEEMKLAKAAMELQ
SENKYKQKGRQEISSSVFHQMPETKETEFAKQISELQSETKYKKDKEDLPVTLYSLLPET
LQTQFVKEMAETHSESKYKQAGKKELVNSLYSLLPETKETQHAKEQTQLCSEKAYREEGK
KEAGCSLYAQMPQTIETVFAKELTKTQSDKFYKEQYNREKGKSSYTNMKTLPEVEHAMEV
NKNQSDVSYRKGKEELHHYNTVPDRPDIVNATNAAKLASDVAYKSNTKQPVYSDGSLLAR
TDIQHAKEVSKLSSQVKYKESSDRLLKGQRPRYNPLDCLSFKHTQAAAALASQVKYKTNQ
NQRPEGSSDLPNLLQLEHVLHASKLQSNVEYKKKYEQTKGHYHVALDTAEQLHHRENAVL
HSQVKYREEYEKNKGRSQMEFGETETYRVSKEAQKMQSEREYRRDYEEQMKGKALVDVDQ
TPGYLTARHASSLLSEKEYRKDLEQEVKGRGLSGIGLEETPELLRVKKANQILNQKEYRR
DLETEIVGKGMELSADVLDIQRAKRASEIQSQRSYRQTEQLRENSYGTVTDTPELLHASY
LRDVYSQKKYKDEAERLKGSYSLVSETPEMERVKANQRHISSLRYCWDSKLMRGLMSSVT
ETPEIVLARENAKRISDVQYREEVGRGTAVMDTPEMERVRRNQENISSVKYRQSAVKATS
VGSTPELERVRQNQENISSVRYQRGLQEVRGRSCTELDTPEYRRVRRTQDSVSMVAARLP
WLPPGLWEDDIHSDVYVCAGFAAQQAKYHEDFERARGRGCTPGLDDPSMERYQRANQMMG
EAGYSKGIHSQGMEMDRRPGGIIVAPVLPGAYHQGVQMQHQQQYHGYMHQTSMSSVRSVT
SPPHSATMRVYRALYDYAAQDHDEVSFRDGDVIINAQPIDEGWMYGTVQRTGKSGMLPAN
YVECCN
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaccctggagactcaacacgccaagcaggcctcacagatccagagccaggtg
aagtacaaagaggacgtgcagaaggatttgtcgtccgctctgttttccagccttcctcaa
accctccagacggagctggccaaggaggtgacggagctgcagagccaggtgaaatataaa
gagggctgtaagaaggaggcggcgtcctccctctatcgcctcctccccgagacgccagag
atgcattttgccaaacagatgtcagagatccagagcgaggttcagcttttctctgatcgc
tctctgaaagctttctctctcctttctctcagcgctgtgtttttaaagtgtttggtcatt
tgttcttctcttaaggcaaagtataagaaggataaagaggatctgcccgtcacgctgcac
tctctgctgcctgagactctgcagactcagtttgttaaagagatggctgagacacacagc
gaggtgaagtataaacaggcggggaagcagcaggcggcgtctctttactccaaactgcct
gaaactctggagaccaaacacgccaaggaagtgactgagctgcagagtgaaaaaaagtac
aaagatgaagggaggaaggagatgacgtcgtctctgtactctcagctccctgaaactgca
gagacccagttcgcccgggagatgactgagatccagagtgagaacaagtataaagaaagt
gggaagaggagtcagactgtctgtgtttactcccagctgccagagaccaacgaaatccag
ttcgccaaagctgtttctgaaatacaaagcgagaccaaatataaagaagcagggaagaag
gaagtgtccagctgtctgtactccaagctgcctgagactctggacactctgcacgctaaa
gaggtgtcccagctgcagagtcaggtgaagtataaacaggagagtaagaaggaggccaga
ggctctctgtatcatcagctgcctgagaccacagagacacagcaggctaaagagctgaga
gatctttacagtgaggtgaagtacaaagaggagggtaagaaggagatcagtaagaacctg
tactcgctcctccccgagacgccagagacacagtttgccaagcagatgtcagagatacag
agcgaggcaacatacaagaaggataaagaggatctgcccgtcacgctgtactctctgctg
cctgagactctgcagactcagtttgttaaagagatggctgagacacacagcgaggtgaag
tataaggaagcaggaaggaaggaggccagcagcgctctgtaccaccgtctgcctgagact
ctggagacgcagcgtgttagagaggtcactgagctccagagcgagaacaagtacaaggag
agcgggaagaagtcgatgtcgtccagtttgtacgctcagctgccgcagacggccgagacg
cagctcgctgccaagatgtcggagctgcacagtgagagtaaatataaagaggacgggatg
aagagcctgtctcagagtttctactctcagctgccagagaccgccgagactcagttcgcc
agagctgtgtctgagctgcagagtgaggccaagtacaaggaggcgagcaggaaggagacg
accagctgtctgtaccaccagctacctgagacactggacactcaacatgctaaagaggca
actgagctgcagagtcaggtgaagtacagggagggtaagaaagagctgagcaccaacctg
tactgtctgctgcctgagaccgaggaaatgaagttagctaaagccgccatggagcttcag
agtgagaacaaatacaagcagaaaggcaggcaggagatcagcagcagtgttttccaccag
atgccagagaccaaagagactgagtttgctaagcagatctctgaacttcagagtgagaca
aagtataagaaggataaagaggatctgcccgtcacgctgtactctctgctgcctgagact
ctgcagactcagtttgttaaagagatggctgagacacacagcgagagtaaatataagcag
gctgggaagaaggagctggttaacagtctgtattctctgctgcctgagaccaaagaaacg
cagcatgccaaggagcaaacgcagctgtgcagcgagaaagcgtacagagaggaggggaag
aaggaggccggctgcagtctgtacgctcagatgccccagaccatcgagacggtcttcgct
aaagagctgaccaagacccagagcgacaagttttataaggagcagtataatcgggagaag
gggaagtccagctacaccaacatgaagacgctgcctgaggtggagcacgccatggaggtc
aacaagaaccagagcgatgtcagctacaggaaaggcaaagaagagctccatcactacaac
acagtgccagacagacccgacatcgtcaacgccaccaacgctgcgaaactggccagtgac
gtggcctataagagtaacactaagcagcctgtttacagcgacggctctttgttggccaga
actgatatccagcacgccaaggaggtttcaaagctgtccagccaggtgaagtataaggag
agctctgacaggcttttaaagggccagaggcctcgttacaacccactcgactgtctctcc
ttcaaacacacacaagctgctgctgctctggccagtcaggtgaagtataagaccaaccag
aaccagagaccagaaggatcctcagacctgccgaacctcctgcagctggagcacgtcctg
cacgccagcaaactgcagagcaacgtggagtacaagaagaagtacgagcaaacgaaaggc
cactaccacgtcgctctggacacggctgaacagctccaccacagggagaacgcagtgctg
cacagccaggtgaagtacagggaggagtatgagaagaacaaaggtcgctctcagatggag
tttggagagacggagacgtacagagtgtcgaaggaagcgcagaagatgcagagcgagagg
gagtatcggagggactatgaggagcagatgaaggggaaagccttggtggacgtggaccag
acgcctggatacctgacagcacgccatgccagcagcctgctgagcgagaaggagtacagg
aaagacctggagcaggaagtgaaggggcgtggtttgtccggcatcgggctggaggaaaca
ccagagctgctgagggttaaaaaagccaatcagatactgaaccagaaggagtaccgcagg
gacctggagacagagattgtgggcaaaggcatggagctgagcgctgacgtcctggacata
cagagagccaagagagcgtcagagatccagagccagaggtcttacaggcagacggagcag
ctccgagaaaactcctacgggacagttacagacactcctgaactgctgcatgcatcctac
ctcagagacgtctacagtcagaagaagtataaggacgaggccgagcggctgaagggcagt
tacagtctcgtatctgaaaccccagagatggagagagtcaaagccaaccagagacacatc
agctctctgcggtactgctgggactccaagctcatgagaggcctgatgtcctcagtcacg
gagacgccggagatcgtcctcgccagagagaacgccaagaggatcagtgatgtccagtac
agagaggaagtgggtcgtggcaccgccgtcatggacacacctgagatggagcgagtccga
cgcaaccaggagaacatcagctcggttaaatacaggcagagtgcagtgaaggccaccagc
gtcggctcgaccccggagctggagagagtccgacagaaccaggagaacatcagctcggtg
aggtatcagcgcgggctgcaggaggtgagggggcggagctgcaccgagctggacacacct
gagtacaggcgcgtcaggaggacgcaggactctgtctccatggtagcggccaggttgccg
tggctcccacctgggctgtgggaggatgatatccactctgatgtgtatgtgtgcgctggt
tttgctgctcaacaggccaagtaccacgaggactttgagcgggcgcgcggccgaggctgt
acgccgggactggacgatcccagcatggagcgctaccagcgagccaatcagatgatggga
gaggcgggctacagcaaaggcatccactcccaggggatggagatggacagacgaccagga
gggatcattgtagctcccgtccttccaggagcgtaccatcagggcgtccagatgcagcat
cagcagcagtatcacggttacatgcaccaaaccagcatgtcatctgtcagatccgtcacc
tccccgccacactcagccaccatgcgtgtttaccgggcgctgtacgactacgcagctcag
gaccacgacgaggtctcgttcagggacggcgacgtcatcatcaacgctcagcccatcgac
gagggctggatgtacggcaccgtgcagagaaccggcaagtccggcatgctgccggcaaac
tacgtggagtgctgcaactaa
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integrated database retrieval system