Lates calcarifer (barramundi perch): 108885025
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Entry
108885025 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ribosomal protein S6 kinase alpha-3
KO
K04373
ribosomal protein S6 kinase alpha-1/2/3/6 [EC:
2.7.11.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04114
Oocyte meiosis
lcf04150
mTOR signaling pathway
lcf04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108885025
04150 mTOR signaling pathway
108885025
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
108885025
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
108885025
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108885025
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108885025
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108885025
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: AGC group
RSK family [OT]
108885025
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108885025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
Kdo
ABC1
Pkinase_fungal
Pkinase_C
Haspin_kinase
YrbL-PhoP_reg
Motif
Other DBs
NCBI-GeneID:
108885025
NCBI-ProteinID:
XP_018534726
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All DBs
Position
LG24:complement(19135840..19176925)
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AA seq
734 aa
AA seq
DB search
MPLAQLADPWQKMPLGGTAGEDAHHDPEDSVGEDDSMPGCTDDVPIKEISITHHVKEGSE
KADPRQFELRKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDI
LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL
DHLHGLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHENKAYSFCGTVEYMAPEVVN
RRGHTHSADWWSYGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSSEAQSLLRN
LFKRNPANRLGAGPDGVEEIKRHQFFSTIDWNKLYRREIHPPFKPAAGRPDDTFYFDSEF
TAKTPRDSPGVPPSANAHQLFRGFSFVAITEEETQPLPNAIVQQLHRSTSQFGDAYEIKE
DIGVGSYSICKRCIHKGTGMEYAVKIINKAKRDPTEEVEILLRYGQHPNIITLKDVYDDG
RSVFLVTELMKGGELLDKILRQKFFSEREASAVLYTITKTVEYLHVQGVVHRDLKPSNIL
YVDESGNAESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKKQGYDAACDIWSLGV
LLYTMLTGFTPFANGPEDTPEEILARIGSGKFSLSGGYWTSVSTEAKDLVSKMLHVDPHQ
RLTAGQVLRHPWVTHRDQLPKYTLNRQDAPHLVKGAMAATYSALNRNVPPILEPVACSTL
AQRRGVKKITSTAL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggctcagttggcagatccctggcagaagatgccactgggggggacggcagga
gaggatgctcatcacgatccggaggactcggtgggcgaggacgactccatgcctggctgc
accgatgacgtgccaattaaggagatcagcatcacccaccatgtgaaggagggctcagag
aaggccgacccgcgacagttcgagctgcgcaaagtcctgggacaaggctccttcggcaag
gtgtttctggtgaggaagatcacggggccagatgccggtcagctgtacgccatgaaggtc
ctgaagaaagccacgctgaaagtgcgcgaccgggtcaggacaaagatggagagagacatc
ctggtggaggtcaaccatcccttcatcgtcaaactgcactacgcgtttcagacggagggg
aagctctacttgatcttggattttctcagaggaggagatctcttcactcgtctctcgaag
gaggtgatgttcacagaggaggacgtgaagttttacctggctgaactcgctctggcgctc
gatcaccttcacggcctcggcatcatttacagagacctcaagcctgagaacatcctgctc
gatgaggagggccacatcaagctgaccgactttggcctcagcaaggagtcgatagaccat
gagaacaaagcctactccttctgcgggaccgtggagtacatggctcccgaggtggtgaac
aggcggggacacacgcacagcgccgactggtggtcgtacggcgtgctcatgtttgagatg
ctgacgggaacgctgccgtttcaaggcaaagaccggaaagagacgatgaccatgatcctc
aaagccaagttgggaatgccacagtttttgagctcagaagctcagagtctcctcaggaac
cttttcaaacgcaaccctgccaacagattaggagctggaccggacggagtggaggagatc
aagaggcatcagttcttcagcaccatcgactggaataaactgtaccgcagagagatccac
cctcctttcaaacctgctgcaggacgacctgacgacactttctattttgattcagagttc
acagctaaaacacccagagactctccgggggttcctcccagtgccaacgcccatcagctg
ttcagaggattcagctttgtggccataacagaggaggaaacacaaccactacccaatgct
attgtacagcaactgcaccgaagcacgtcccagttcggagacgcctacgagatcaaagag
gacatcggcgtcggctcctactccatctgcaagcgctgcatacacaaaggaaccggcatg
gagtacgccgtcaagatcatcaacaaggccaagagagacccgacggaggaggtggagatc
ctgctgagatacgggcagcatcccaacatcatcaccctcaaggacgtgtatgacgacggc
cggtcggtgttcctggtgacggagctgatgaaaggaggcgagctgctggacaaaatcctc
cgacagaagttcttctccgagagagaagccagcgctgttctctacaccatcaccaagact
gtggagtacctgcacgttcagggggtggtgcacagagacctgaagcccagtaacatcctg
tacgtggatgagagcgggaacgccgagtccatcaggatctgcgactttggtttcgccaaa
cagctgagggcggagaacggcctgctcatgacgccgtgctacaccgccaactttgtcgca
ccagaggtgttgaagaagcagggttacgacgcagcctgtgacatctggagcctcggcgtc
ctgctctacaccatgctaacaggcttcactcccttcgccaacggtccggaggacacaccg
gaggagattctggctcgtatcggcagcgggaagttctctctgagcggaggatactggacg
tctgtttctactgaggcaaaggacctggtgtctaagatgctgcacgtggacccgcaccag
cggctgacggcgggtcaggtcctcagacacccctgggtgacgcacagagaccagctgccc
aagtacaccctcaacagacaggacgccccgcacctcgtcaagggtgcgatggcggccacc
tactcggccctcaacaggaacgtccctccgatcctggagccggtggcctgctccactctg
gcccagcggaggggggtgaagaagatcacctccaccgctctgtga
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