Lates calcarifer (barramundi perch): 108885109
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Entry
108885109 CDS
T04895
Symbol
tfr1b
Name
(RefSeq) transferrin receptor 1b
KO
K06503
transferrin receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03273
Virion - Lassa virus and SFTS virus
lcf04144
Endocytosis
lcf04145
Phagosome
lcf04216
Ferroptosis
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108885109 (tfr1b)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108885109 (tfr1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108885109 (tfr1b)
04145 Phagosome
108885109 (tfr1b)
09143 Cell growth and death
04216 Ferroptosis
108885109 (tfr1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108885109 (tfr1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108885109 (tfr1b)
04090 CD molecules [BR:
lcf04090
]
108885109 (tfr1b)
Peptidases and inhibitors [BR:
lcf01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
108885109 (tfr1b)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108885109 (tfr1b)
Exosomal proteins of colorectal cancer cells
108885109 (tfr1b)
CD molecules [BR:
lcf04090
]
Proteins
108885109 (tfr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M28
PA
TFR_dimer
RE_XamI
Motif
Other DBs
NCBI-GeneID:
108885109
NCBI-ProteinID:
XP_018534822
UniProt:
A0A4W6BSA3
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All DBs
Position
LG24:complement(16740344..16753371)
Genome browser
AA seq
758 aa
AA seq
DB search
MDRVRSAFNNMIKSERYSRFTLQPAEDGERHVEVKLSDDATDDAMEVEGQAGGSPSFRPA
PLHQNRRHLFYVVLVTLLIFVTGYLVGYVSHRKPQVEPVNPVSENENRLQATPTDYAPSP
EIQLDWKDVTQLLSQKLTSKAFEKTLRDFNLPRRSAGSAEDMNQANRIFDEFKKLEMDPW
SDIHYVQLQMPDSNRPNRVLFGSDVFKPAGYLAYSATGKVEGKLVYGNYGRQEDLDVLQK
KSVELKDSVLLLRSGKISFAEQVDNAAKKGASAVLIYPDIQDYKYLADTALYGHVHLGSG
DPYTPGFPSFNHTQFPPTQSSGLPKIPAQTITANMAFGLLQKIEGPESDVSSGFKGGFKS
VSYSLGGSKNITVEVNNVLVNKEVHNVFGIIKGFTDPDRYVVLGAQRDAWGNGYARATVG
TSVLMELAKAVCEMVEKDGFRPRRSLVFASWSAGEYGNVGATEWLEGYMSSIDKKVFTYI
SLDGVVLGRGNFTTSASPLLYSLIENTMKEVNSPLGLGSVYDMVGRKNWEAILKPMAIDD
PAYPFLAFSGIPSVSFHFISPNTESYSYYGTSLDNMDHLNYQTNQRTAEMTAVAAQFAGQ
MALRLVHDHVLNLDVSRYSSVLYKAVVRVYRRINQLLRSGQLKDVSPNWLSRARGSFQRA
ADDINRAIVNTDLSDKEACRILNDRIMAVEHTLLSPYVSPVETPFRHLLLGRGSHTLASI
AETNDMEQLHIQLALATWNLQGCANAMVGNIWDIDNEI
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagtgaggtctgcatttaacaacatgattaaaagtgagcggtatagcaggttc
accctgcagccggcagaggacggagaaagacacgtcgaggtcaaactgtccgacgatgcc
acagatgacgccatggaggtcgagggccaggctgggggctcgccgagcttcaggccagca
cctctccatcaaaaccgccgtcatcttttctatgtggtcctggtaacactgctgatattt
gtcactggctacctggttggttacgtcagccacaggaaacctcaggtggagccggtgaac
ccagtgtcggagaacgaaaatcgtctgcaggcgacaccgactgattatgcaccatctccg
gaaattcagctggactggaaggacgtcacccaactcctctcacagaaactcaccagcaag
gcctttgaaaagactctgagggattttaatctgcccagacgttcagcaggaagtgcagaa
gatatgaatcaggcaaatcgcatttttgatgaattcaagaagctggaaatggacccatgg
agtgacatccactatgttcagctgcagatgccagacagtaatcgcccaaaccgtgttctt
tttgggtcagatgtcttcaagcccgcagggtatttggcctacagtgctactgggaaagtt
gagggaaagctagtgtatggaaactatggtcgtcaggaggatctggatgttctgcagaag
aagagtgttgagctgaaagacagtgtgctgcttctcagaagtggaaagatcagttttgca
gagcaggtggataatgctgcaaaaaagggggcctctgctgttcttatctaccctgacatt
caagattacaagtatctagcggacacagcactgtatggacatgtccatctgggttcaggc
gacccttacacacctggattcccctccttcaaccacacccagtttcccccaactcagtca
tctggccttcccaaaatcccagcccagaccatcactgccaacatggcttttggtcttcta
cagaaaatcgagggccctgaatcagatgtgagcagtggttttaaaggaggcttcaaatct
gtgtcatacagcctgggaggcagcaagaacatcaccgtggaggtgaacaacgtgctggta
aacaaggaggtccataatgtgtttggaatcatcaaaggattcactgatcctgatcgctat
gttgtactgggagctcagagagatgcctggggtaacggttatgccagagccactgttggc
acctccgtactgatggagctggccaaggctgtctgtgagatggtggagaaagatggattc
aggccgaggagaagcctagtgtttgcaagctggagtgctggagagtatgggaatgttggc
gccactgagtggttggagggttatatgtcctctattgacaaaaaggttttcacttacata
agcctggatggagtggttctgggtcgagggaactttacgacctcagctagtcctctgctc
tacagcctcattgaaaatacaatgaaagaggtgaatagtcctctcggtttaggctctgtg
tatgacatggtgggaagaaaaaactgggaggccatactgaagccgatggcgatagatgac
cctgcctatccctttttggccttctctggaattccctctgtctctttccacttcatctcc
cccaatactgagtcttacagttactatggcaccagccttgacaacatggatcacctcaac
taccaaaccaaccagcgcactgctgaaatgacggcagtggcggcgcagtttgccggccag
atggctctgcgactggtccacgatcacgtgctcaatctggacgtgagccgatacagcagc
gtcctctacaaggctgtggtcagagtctacagacgcatcaaccagctcctacggtctggt
cagctgaaggacgtgagccccaactggctgagccgtgcacggggctccttccaacgagcc
gctgacgacatcaaccgagctatcgtcaacactgatctaagtgacaaggaggcctgtcgc
atcctcaacgacaggatcatggcggttgagcacaccctcctctctccgtatgtgtcccct
gttgagactcctttccgtcacctcctgctgggccggggctcccacactttggcgtccatc
gccgagaccaacgacatggagcagctccacatccagctggccttggccacctggaacctg
caggggtgcgctaacgccatggtgggaaacatctgggacatcgacaacgaaatctaa
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