Lates calcarifer (barramundi perch): 108885129
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Entry
108885129 CDS
T04895
Symbol
sstr1b
Name
(RefSeq) somatostatin receptor type 1
KO
K04217
somatostatin receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108885129 (sstr1b)
04081 Hormone signaling
108885129 (sstr1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108885129 (sstr1b)
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Peptide
Somatostatin
108885129 (sstr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
V1R
DUF2633
Motif
Other DBs
NCBI-GeneID:
108885129
NCBI-ProteinID:
XP_018534833
UniProt:
A0A4W6FI88
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All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MDFNGSQDYGSYPTGLPYNTSMDYEDYYQEPDVSKIIIPSIYALVCCIGLTGNAMVIYVI
LKYAKMKTATNIYILNLAIADELFMLSVPFLATSAAVRHWPFGSLMCRLVLSVDGINMFT
SIFCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNVCVWGLSLIVILPIIIFADTVPAQD
GGVDCNFLWPEAAWSEAFVVYTFLLGFLLPVGAICLCYCLMVARMRAVGLKAGWLQRRRS
EKKITRMVLLVVAVFVLCWMPFYIVQLVSVFHRPPDPMVTQLFVILSYANSGANPILYGF
VSDNFRRSFQRIVCFRWLESGLDVEQVDYCAVALKRQATCSPLDFPKDCMASEMVFRNGT
YTSRTTTV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaatgggagccaggactatgggtcctatccaacaggactgccctataacaca
agtatggactatgaggactactaccaggagcctgatgttagtaaaatcatcatcccatcc
atctatgctcttgtctgctgtataggtctcacaggcaatgccatggtcatctatgtcatt
ctgaaatatgccaaaatgaaaacagccaccaacatttatatccttaacttagctattgct
gatgagttgttcatgttgagtgttccttttttggccacatcagctgctgtccgtcattgg
ccctttgggtcactgatgtgtaggttggtgctgagtgtagatggcatcaatatgtttaca
tcaatcttctgcctgactgtgctgagtgtggatcgttatgtagcagtggtccaccctatt
aaagccgcccgctaccgcagacccactgtagccaaggtagtcaatgtgtgtgtatggggg
ctgtcgctcatagtcatcctgcccatcattatttttgcagacactgtcccagcacaggat
ggtggtgtggactgtaacttcttatggcctgaagcagcatggtcagaagcatttgtggtc
tataccttcctgctggggtttctgctgccagttggagctatctgtctatgttactgtcta
atggtggccaggatgcgagcagtggggctaaaagctggctggcttcaacggcggcgctca
gagaagaagatcactcgcatggtcctgctggttgttgcagtgtttgttctctgttggatg
cctttctacattgtccagttagtcagtgtttttcaccggcctccagatcccatggtcact
cagctttttgtcatcctcagctacgccaacagtggtgcaaatcccatcctgtacggcttt
gtgtccgacaatttccggcgttcattccagcgcattgtgtgtttccggtggctggagtct
gggctggatgtggaacaggtggattactgtgctgtagctttgaagagacaagcgacatgt
agtcccctggattttcccaaggactgcatggcttctgaaatggtgtttcgcaatgggaca
tatacctcccgtacaaccacagtgtaa
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