KEGG   Lates calcarifer (barramundi perch): 108885170
Entry
108885170         CDS       T04895                                 
Name
(RefSeq) pituitary homeobox 2 isoform X1
  KO
K04686  paired-like homeodomain transcription factor 2
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    108885170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108885170
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    108885170
SSDB
Motif
Pfam: Homeodomain OAR Homeobox_KN XRCC4_C Auxin_canalis
Other DBs
NCBI-GeneID: 108885170
NCBI-ProteinID: XP_018534897
UniProt: A0A4W6F6S7
LinkDB
Position
LG8:20258987..20269923
AA seq 313 aa
MNSMRDPLNTDHHHLTGNKLASTHYTALAMASSLQPLQRSVDSKHRLEVHTVSDTSSPES
VEKEKIQNKNDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWT
NLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNNWAAK
GLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMTSSMVPSAVTGVPGSSLNSLNN
LNNLSNPSLNSGVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPAT
NLSACQYAVDRPV
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaactctatgagggatccattaaacacagaccatcaccacctaacagggaataaactt
gcctccacgcactacactgctctggcgatggcctctagtttacagccgctgcagcggtct
gtggactctaaacaccggttagaggtgcacaccgtgtcggacacatccagtccagagtca
gtcgaaaaggaaaagatccaaaataaaaacgacgactcttcagatgacccatctaaaaag
aagcggcagcggcggcagaggactcacttcaccagccaacagctgcaagaactggaggcc
actttccagaggaatcgctacccggacatgagcacgagggaggagatagccgtgtggacc
aacctcacagaggcccgggtcagggtttggttcaagaaccggcgagccaagtggaggaaa
cgggaaagaaaccaacaagccgagctttgcaaaaacggtttcggcccgcagttcaatgga
ctcatgcagccctacgacgacatgtaccccagctacacgtacaacaactgggccgccaag
ggcctaacgtcggcctccttatccaccaaaagcttccccttcttcaactccatgaatgtc
aaccccttatcctcgcagaccatgttctcgccgcccaactccatatcctccatgacttcc
agcatggtgccatcggcggtgacaggggtgccgggctccagcctcaacagcctcaataac
ttgaacaacctcagtaacccgtctctcaactccggggtgcccacgccggcgtgcccctat
gcgcctccgacccctccttacgtgtacagggacacttgtaactccagcctggccagcctg
agactgaaagccaagcagcactcgagttttggatacgccagtgtgcagaatccggcaact
aatctgagcgcttgccaatacgccgtggacagaccagtctaa

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