Lates calcarifer (barramundi perch): 108885193
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Entry
108885193 CDS
T04895
Name
(RefSeq) relaxin receptor 1 isoform X2
KO
K04306
relaxin family peptide receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108885193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108885193
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Peptide
Relaxin
108885193
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
7tm_1
LRR_4
LRR_5
LRR_1
LRR_9
Ldl_recept_a
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
108885193
NCBI-ProteinID:
XP_018534940
UniProt:
A0A4W6FEA4
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Position
LG8:20872753..20939735
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AA seq
789 aa
AA seq
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MQVYLAVIFAYGVLALNITEEKATCPLGYFPCGNLTMCLPQLMHCNGIDDCGNQADEENC
GDNNGWPHLFDKYFGMPSYNTGTKSNVCLLGAVPELCQCRDLELDCDSTQLQDIPVVAMN
VTMMSLQRNHLWRLRANIFFKYQSLQKLYLQHNKIQDVSPDAFRGLYNLTRLYLSYNKIS
ILMPGVFQDLHKLEWLILENNNIHQISSMTFSGLNSLVLLVLLNNSLTKLDDICREMPRL
NWLDLEGNLIETIGNVSFCSCSMLTVLVLQRNRISHIHEQAFSVLRKLGELDLSNNRLVT
IPPNLFVLLGDLLQLNISYNTIVELQVDHFDKLHKLKSLSIEGIEIGNIQRRMFEPLKYL
THIYFKKFQYCGYAPHVRSCKPNTDGISSFEDLLANIVLRVFVWVVSATTCFGNIFVICM
RSYIRSENKLHAMCIISLCCADGLMGIYLFMIGAYDLKFRGEYNRHAQAWMDSSQCQVIG
SLAMLSTEVSVLLLTYLTLEKYICIVYPFQYLTPGWRRTVTILLGIWVFGFIVAFLPLAC
KGLFRNFYGTNGVCFPLHSEQPETLWAHVYSIVIFLGLNLVAFLIIVLSYASMFYNIQRT
GTQTTKYSNHIKKEVTIAKRFFSIVITDSLCWIPIFILKILSLLQVEIPGTISSWVVIFI
LPINSALNPILYTLTTRPFKETIMQVWANYRQKRPLLSGHPAHHPSLTWQEMWPLQENSH
GLTPGHPLEMTSALAKLTPVENANEEYNGTAACTQQQQKQHTVLSVRSQKQTPNMLTNNH
THTQTNELI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtttatttggctgtgatattcgcttatggagtcttggcgctcaatatcacagag
gagaaggcgacatgcccccttggatatttcccctgtggcaatttgaccatgtgcctccct
cagctcatgcactgcaatggcatcgatgactgtggaaatcaggcagatgaggagaactgt
ggagataataatggatggccccatctcttcgacaaatattttggcatgccgagctataat
actgggaccaagtccaatgtatgcttgctgggtgccgttcctgagctctgccagtgccga
gaccttgagctggactgtgacagcacacagcttcaagatatcccagtggtggcgatgaat
gtcaccatgatgtctctacaaaggaaccatctttggaggctgagagcaaacatattcttt
aagtaccagagcctacagaaactataccttcagcacaataagattcaagatgtgagtcct
gatgcattcagagggctgtataacctaacaagactatatctgagctacaacaagatatcc
atcctgatgccaggggtgttccaggaccttcacaagctggagtggctgatccttgaaaat
aacaacatccatcaaatatcctccatgaccttctcaggattgaactctcttgttttactg
gttctgttgaacaactctttgacaaagctggatgacatctgtcgagaaatgccaagattg
aactggctggatttggagggaaatctcatagaaaccattggaaatgtctcattctgctca
tgcagtatgctgacagttctggttttacagcgaaacaggatcagccatatacacgaacag
gctttctctgtcctccgaaagctcggagaattggacctatccaacaacagactggtgaca
attccacccaatctctttgtcttactgggggatttgctccaactgaatatatcatacaat
accattgtggagctccaagttgaccactttgacaagctgcataagctcaagtcattgagc
atagaggggatagagattggaaacatacaacggcggatgtttgaacctctcaaatacttg
actcatatctactttaagaagttccagtactgcggctacgctcctcatgtgcgcagctgc
aagccaaacactgacggcatctcgtccttcgaggatctgctggccaacatcgtgctgagg
gtctttgtctgggtggtgtctgccaccacctgcttcggcaacatctttgtcatctgtatg
cgctcgtacattcgctcggagaacaaactacatgccatgtgcatcatctccctctgttgt
gcagacggcctgatgggcatctacctcttcatgattggtgcatatgacctgaagtttcga
ggagagtacaataggcacgctcaggcctggatggacagcagtcagtgtcaggtcatcggc
tctttggccatgttgtccactgaggtatccgtcctgctcctcacctatctcactctggag
aagtacatctgcatcgtctaccctttccagtacttgacacctggctggcgaagaactgtc
accatcctcctcgggatttgggtgtttggctttattgttgccttcctgccattggcctgt
aaggggctatttcgtaacttctacgggaccaatggcgtttgctttccgctgcactcggag
cagcctgagacgctatgggctcatgtttactccatcgttattttcctgggtctgaacttg
gtggcgttcctcatcattgttctatcatatgcaagcatgttctataacatccaaagaaca
ggcactcaaaccacaaaatacagcaaccacatcaagaaagaggtgaccatcgccaaaagg
ttcttttccatcgtcattactgactccctttgctggattcccattttcatcctcaagatc
ctgtcactgctgcaggtggagattcccggcaccatcagttcctgggtggtcatatttatt
ctccccatcaacagcgctcttaaccccatcctttacacactgaccacacggcctttcaaa
gagaccatcatgcaggtgtgggctaactaccggcagaagaggccactgctcagcggtcac
ccagctcatcatccgtcgctcacctggcaggaaatgtggcccctgcaggagaacagccat
ggcctcaccccggggcacccactggaaatgacaagtgcgctcgccaagctcacccctgtg
gaaaatgccaacgaggagtacaatggcactgctgcgtgcacgcagcagcaacagaagcag
cacacagtcctgtcagtacgctcacaaaaacaaacaccaaacatgctcacaaacaatcac
acacacacacaaacaaatgaactcatttag
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