Lates calcarifer (barramundi perch): 108885224
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Entry
108885224 CDS
T04895
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108885224
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108885224
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
108885224
NCBI-ProteinID:
XP_018534972
UniProt:
A0A4W6FYZ9
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Position
LG10:complement(369844..373332)
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AA seq
413 aa
AA seq
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MAYPQGFLFQPSVSLALHSCPSFSSGVILGPRTEELGRSSSGSAFAPYSGSATSPGFNSH
LPYGGEPRAAATLSSFVSPGYDPSSGISGSLDYHPFGAMGPYPYGDPTYRKNATRDATAT
LKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRSED
EEEEDNIDLERNDEDEEPMKTSNDETETKSEAAGHRPSSGGASCVLTFRDDSDTDRGFTD
PDRPPLIPGPAPTGPPSPQNLPLGMLRASELEHTPSPPAKEHGDSCGAIQGPNTAPKPKL
WSLAEIATSSDKTKGPNESSQSGGASTPRTPFPHSPALPRHLYYTSPFIPGYSNYGPLGP
LHGSPGSHLASATHLNGLQQTMLQRAEAAARDCKLRSQSQLELHELKKGMTNM
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcctcagggcttcctcttccagccgtccgtgtctctggctctgcactcctgc
ccgtccttcagctccggggtcatcttaggaccgaggacggaggagctgggccgctcctct
tcgggctccgccttcgctccgtactcgggatcggcgacctctcccggattcaactcgcac
ctcccgtacggcggagagccccgggccgccgccacactcagctccttcgtgagtccaggc
tacgacccgtcctccggcatctccggctccttagactaccacccgttcggggccatgggg
ccctacccgtacggagaccccacctacaggaagaacgccacgcgggacgccacggccacg
ctgaaggcctggctcaacgagcaccgcaagaacccctaccccaccaagggggagaagatc
atgctggccatcatcaccaagatgaccctgacccaggtgtccacctggttcgccaacgcc
cgccgccgcctgaagaaggagaacaagatgacctggacccccaggaacaggagcgaggac
gaggaggaggaggacaacatcgacctggagaggaacgacgaggacgaggagccgatgaag
acgagcaacgacgagacagagaccaagagcgaggccgctggccatcgtccgtcctcgggg
ggagcctcctgtgtgttgacgttcagagacgacagcgacaccgaccgaggcttcacggac
ccggacaggccgcccctcatcccgggccccgcccccacgggccccccctctccccagaac
ctcccgctcgggatgctgagagcgtcagagctggagcacacgccgagcccgccggccaag
gagcacggagactcctgcggcgccatccaggggccaaacacggcccctaaacccaaactg
tggtccctggctgagatcgccacgtcctcggacaaaactaaaggacctaatgagtcctct
cagagcgggggggcctccacgccccggaccccgttcccccacagccccgccctgccccga
cacctctactacacctcccccttcatcccgggatactccaactacggccccctggggccc
ctgcacggcagccccggctcacacttggcctccgcgacgcatttaaacggattacagcag
acgatgctgcagagagccgaggccgcggccagagactgtaaactgcgcagtcagagtcag
ctggagctgcacgaactcaagaagggcatgacgaacatgtag
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