Lates calcarifer (barramundi perch): 108885255
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Entry
108885255 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein broad-minded
KO
K28444
TBC1 domain family member 32
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108885255
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108885255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BROMI
BROMI_C
BROMI_N
RabGap-TBC_2
RabGAP-TBC
MRP-S26
Motif
Other DBs
NCBI-GeneID:
108885255
NCBI-ProteinID:
XP_050927714
UniProt:
A0AAJ8B845
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Position
LG7_1:complement(4280215..4349641)
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AA seq
1300 aa
AA seq
DB search
MSHLSAEDEVELQSLLKQLLRSVSDRISGAPSTECAEEILLHLEETDKNFHNYEFVKYLR
QYVESSLGTVMDEETKDLTRGDGQHAIGSGHDTLIHAVTRRTRDSAEYEHMMQTLKNTMI
MVVESLINKFEEDQMRKEEMQKQHSQSNSQYIDNCSDSDSSFNQSYAFIRQEQLQVLAEK
LDPSRPKEVRWEALQALCCAPPSDVLSCESWSSLRRNLCAALTEPDPDLSDNVLQFFAKS
FSSSPMNVTREIYTSLAKSVESSFLSQKLSFPSGSATIDINRPEIVRLLKQIRLMNDFQK
EVTTFWIRHPEKYMEEVIESTFSLLSFHQEHGSASPRTEKALEPIHLLALLDIKATWFKK
WMHGYYSRTVVLRLLERKYKALIVAALQQCIHYSESCERFTNETTDPQSAEQQSTVQRSV
YSGRELEYAFFVHSLCVLGKLLIYTNGRKLFPIKVKKRKDPVSLTDLVVILINIMYQHPK
PPHTDTSHTDSLSPSSLVMEVLWMLCERTECAAECLYQTAVIETLLAPVIALLDGQKAKL
KSPAATLTLIADILARIANTDRGLNLFLYEKNLLVAHSERTFAALAIVQFTLKLLDKELS
SLIESDTSHTLCGAFIFVCRQIYNTCEGLQVLRPYGLHKAVAAAWKKSSSLSERIPTPVP
GATAGASTQELQNMLIWEETLLDSLLNFAATPKGLLLLQQTGAINECVSYMFSRFTKKLQ
VSRCEKFGYGVMVTQVAATAPGVVALHSSGFVRALVIELWSTLECGSEDVRVVRPKPTPM
DPIDRSCLKSFLSLVNLLFSSQSVWELLGRQPLANKSEYTLREMPTSIPDLIDRLIAVNS
DAKINSVFHYEQSHTFGLRLLSVLCCSLDSFLLLESQYNICSMLLQSQRENVTEPDTSEG
EFIIDSLSVERNHVLVRVSVVGGPSERRLPPRALQEGEDPYPWPMFSSYPLPHCYTLDPP
KIIHDSHDSEISAFLASSTDTKSDESWMAICRRQYCKLMTSKSSILTGKVLADLLEKVVA
HLSSSATECFFSPAQYKAEEKSVKSAVLSSVEQLGINTCLRYGSYLKLLKDDALHNLTLL
MKHIKIFLSSQRVKTSSELITQQDGYPGHDWLASTVFLIMAGDMDRSLRLLLNLSSLLTS
AFIWPARIHASVHVPVGVAESGIPPVYWCTAHYVEMLLKAEVPLVHSAFRMSGFTPSQMC
LHWLTQCFWNYLDWTEVCHYISTCVLMGPDYQVYTCVAIFKHLQPDILQRTQSQELQVFL
KEEPIQGFKVSDYLEFMEGLERSYRDTVLTDMKTIGNPAE
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttgtcagctgaagatgaggtggagttgcagtctttgctcaagcagcttctg
agaagcgtcagtgacaggatctctggcgctccgtcgactgaatgtgctgaagagattctt
cttcacctggaggagactgacaagaatttccacaattatgagtttgtcaagtacctccgt
cagtatgtggaaagctctctggggactgtcatggacgaggaaaccaaggacctgaccaga
ggagatggacaacatgcaattggctcaggtcacgacaccctgatccatgctgtcacccga
aggaccagagactcagctgagtacgagcacatgatgcagaccttgaaaaacaccatgatc
atggttgtggagtctttaatcaacaagtttgaggaagaccagatgaggaaggaggagatg
cagaagcagcacagtcagtcaaacagccagtacattgacaactgctctgatagcgactcc
tcctttaaccagagttatgcatttatcagacaagaacagcttcaagtcttggctgaaaaa
cttgaccccagcagacccaaagaggtgcgttgggaggctcttcaggccctctgctgtgcc
cctccctctgatgtgctgagctgtgagagctggagcagcctgcgcaggaatctctgtgca
gctctgactgagcccgacccagacttgagtgataatgttttgcagttctttgctaaaagc
ttctcctcctctcctatgaatgtgacacgagagatctacaccagcttggccaaaagtgtg
gagtcaagttttctgtctcagaagcttagcttcccatcaggctcagctaccattgacatt
aacagacctgagattgttcgtcttctcaaacagattcgattgatgaatgactttcagaag
gaggtgacaaccttttggatccgtcatccagagaagtatatggaggaagttatagagagc
accttctccctgttgtccttccatcaagaacatggctcagcttctcccaggacagagaaa
gccctggaaccaattcatttactggccttactggatattaaagctacctggtttaaaaag
tggatgcatggctactacagtaggactgtggttctaagactcctggagagaaaatacaag
gccttgattgttgcagctcttcagcagtgtattcattacagtgaatcctgtgaacgcttc
acaaatgagacaactgatccccagtcagcagagcagcagagcactgtccagaggagtgtt
tattcgggaagggagcttgaatatgccttctttgtccactctttgtgtgtcctgggaaaa
ctcctcatctacaccaatggaaggaaactgtttcccattaaagtgaagaaacgcaaagat
ccagtcagcctgacggacctggtcgtcatcctgattaacatcatgtaccaacaccccaag
cctcctcacactgatacctcacacacagactccttgtcgcccagcagtctggtgatggag
gtgctgtggatgctgtgtgagagaacagagtgtgctgcagagtgtctctaccagactgct
gtcatagagacactgctggctcctgttatagctctgctcgatggacagaaggccaaatta
aagtctcctgcagctacactgactctcattgctgacattctggctcgcatcgctaacact
gacagaggattaaatcttttcttatatgagaagaatctccttgtggctcacagtgagaga
acctttgctgctcttgccattgtgcagtttaccctgaagctgctggataaggagctgtca
tcactaattgaatccgacacatcccatacattgtgtggagcttttatctttgtctgtagg
cagatatacaacacctgtgaaggtctacaggtcctgcgaccctatggcctgcacaaggct
gtagctgctgcatggaaaaagagcagctccttgtcagaaaggataccaaccccggtacct
ggggccactgcaggagcctccacccaggaactacagaacatgctcatctgggaggagaca
ttgttggacagcctgctgaatttcgctgcaacacctaaaggcctgctgctgctccagcag
acaggagccattaacgaatgtgtctcctatatgttttctcgctttactaaaaaactacag
gtgagccgctgtgagaagtttggatatggagtgatggtgacacaggtggcagcaactgct
ccaggggtggtggctttgcactcttcaggttttgtccgggcactggtgatcgagctgtgg
tcaactctggagtgcggaagtgaagatgtgagggtggtccgtcccaaaccgacacccatg
gaccccatcgacaggagctgcctcaagtccttcctgtctttggtcaacctgctcttctct
tcccagtcagtatgggagctgctgggccgacagcctttagccaacaagagtgaatacacc
ctgagagaaatgccaacctcgattcctgatttgattgacaggctgattgctgtgaattca
gatgcaaagattaattccgtgttccactacgagcagtctcacacatttggcctcagactg
ctcagtgtgctctgctgtagtctggactcatttctgctgctggagagccagtacaacatc
tgctccatgctgctgcagagtcagagggagaacgtcactgagcctgacaccagtgagggg
gagttcatcatagacagtctgtcagtggagaggaatcatgtgctggttcgtgttagtgtg
gtgggagggccatctgagagaaggcttcctcctcgagctctgcaagagggtgaagatcct
tacccctggcccatgttttcaagctaccctctacctcactgctacaccttggacccacca
aagatcatccatgactcacatgactctgagatcagtgcatttttggcatcatctacagac
acaaagagcgacgagagctggatggcgatctgtcggaggcagtactgcaaacttatgacc
tccaaatccagcatcctaactggaaaagtgctggctgaccttctggagaaggttgtggcc
catctatccagctctgccacagagtgcttcttctctccagctcagtacaaagcagaggag
aagagtgtgaagagtgctgtattatcatctgtggaacagctgggaatcaacacctgtctc
aggtacggcagctacctcaagctactgaaagacgatgctctgcacaacctgacgctgcta
atgaagcacataaagatcttcttgtcctcgcagagagttaaaacgtcttctgagctcatc
actcagcaggatggttatccaggacacgactggctggcctccacagtcttcctcatcatg
gcaggagacatggaccgatctctgcgtttgttactcaacctctcctctctgcttacctct
gcattcatctggcctgcaaggatacatgcatctgtccatgtccctgtgggagtggctgaa
tcaggaatccctcctgtctactggtgtacagctcactatgtggaaatgctgctgaaagct
gaggttcctctggtccactctgccttcaggatgtctggtttcaccccatcacagatgtgc
ctccactggctgactcagtgtttctggaactatctggactggacagaagtctgccactac
atctccacctgtgtgctgatgggtcccgactatcaggtttacacgtgcgtggccatattc
aaacacctgcaaccagacatcctgcagcgcacacagtcccaggagctgcaggtcttcctc
aaggaggagccgatccagggcttcaaggtcagcgactacctggagttcatggagggactg
gagagaagctacagagacactgttctcactgacatgaaaactataggaaaccctgcggag
tag
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