KEGG   Lates calcarifer (barramundi perch): 108885280
Entry
108885280         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat domain phosphoinositide-interacting protein 3
  KO
K22991  WD repeat-containing protein 45
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108885280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108885280
Membrane trafficking [BR:lcf04131]
 Autophagy
  Other autophagy associated proteins
   Others
    108885280
SSDB
Motif
Pfam: PROPPIN Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_WDHD1_1st BCAS3_WD40 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_VPS8 WD40_Prp19 ANAPC4_WD40 WD40 Beta-prop_Vps41 Beta-prop_IFT122_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_HPS5 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_IFT140_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_DCAF12 DUF5711 Beta-prop_NUP159_NUP214 DUF1513 DUF3761 Beta-prop_EMC1_N
Other DBs
NCBI-GeneID: 108885280
NCBI-ProteinID: XP_018535072
LinkDB
Position
LG23:777965..785704
AA seq 344 aa
MNLLPSNPHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEML
FRCNYLALVGGGKKPKYPTNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMI
KVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHSGHVQIVDLANTEKPPVD
IPAHEGALCCIALNLQGTRIATASEKGTLIRIFDTSAGQLIQELRRGSQAANIYCINFNQ
DASLICVSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQVPSGSPCVCA
FGTEPNAVIAICADGSYYKFLFNQKGECSRDVYAQFLEMTDEKI
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaatttactaccgtctaatcctcatgggaatgggctcctttatgctggatttaaccag
gatcacggatgcttcgcctgtggaatggaaaatgggtttcgtgtgtacaacacagatcct
ctcaaagagaaggagaaacaagagttcctggagggcggggtcggccacgtggagatgctg
tttaggtgtaactatctagcactggtgggaggagggaagaaacccaaatacccaactaac
aaagtgatgatatgggatgacctgaagaagaagacagtcattgagattgagttctcaaca
gaggtcaaggcagtgaagcttcgacgtgacaggatcgtggtggtcctggactcaatgatc
aaagtgttcacctttactcacaacccccatcagctgcatgtgtttgagacctgctacaac
cccaaaggtctgtgtgtgttgtgtcccaacagtaacaactctctgttggccttccctgga
actcattcaggccacgtgcagatagtggatctggccaacacagagaagccccctgttgac
attcctgcccatgagggggcgctgtgctgcatcgctctcaacctgcagggcaccaggata
gctactgcgtcagagaaaggaactcttataagaattttcgacacgtctgcaggtcagctg
atccaggagctgagacgaggctctcaggcagctaacatttactgcattaatttcaaccag
gatgcgtccctcatctgtgtgtccagtgaccacggcacagtgcacatctttgctgcagag
gatcccaagaggaacaaacagtccagcctggcatcagccagctttctccccaaatatttc
agctctaaatggagcttctccaagttccaggtcccctcaggctcaccctgtgtgtgtgct
tttggaacagagcccaatgctgtcatagccatttgtgctgacggcagctactacaagttc
ctgttcaaccagaaaggggagtgttccagagacgtctacgcccagttcctggagatgacc
gatgaaaaaatatga

DBGET integrated database retrieval system