Lates calcarifer (barramundi perch): 108885337
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Entry
108885337 CDS
T04895
Symbol
si:ch211-267e7.3
Name
(RefSeq) LOW QUALITY PROTEIN: ADAMTS-like protein 2
KO
K24430
ADAMTS-like protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108885337 (si:ch211-267e7.3)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
108885337 (si:ch211-267e7.3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
PLAC
TSP1_spondin
TSP1_CCN
RIF5_SNase_2
Motif
Other DBs
NCBI-GeneID:
108885337
NCBI-ProteinID:
XP_018535151
UniProt:
A0AAJ7PPI4
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All DBs
Position
LG4:23756366..23779728
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AA seq
1029 aa
AA seq
DB search
MFGNGGLALPVCSFLLLHLPVLPLTNNWPIKDRSEGRVEQRNIHLQSHSHGSLNVRQMSN
KEEVFQWWGEWSSWSSCSRSCGGGVRSQERHCLIQRLSTTQNINSSYCVGSPKQYQLCPN
KPCPNPSVSFKQHQCSQFNSKAFGRKYYQWIPLYPADYISISNKPCDLQCTTISGERQLL
VPAHDGTFCRDTKFHGVCIEGICQPVGCDGELYSSKTVDRCGVCGGNGASCQRISGSYRK
ALTQLGYVFITNIPAGATDIQIIERHKTENILALSDEGGHFFFNGKTVFDNPQNFHVAGT
VFKYRRPSSVFSDGLEYIIAQGPTLQGLNVMYYNLNGKLPHITYEYTIPLKSYDMTAAEG
VTTSPGRSHLNFTYNVVNEDVREGQVNFTNHSRGSTTSYHHYNTQLVDDDQSDIQLQEDE
EEEVVWEIRTPSPPPPAAMLVYRPADITSHVFSLNDVEEQGPPAPSGYRSSSNSIDEPST
TDDNTLVHSYPGSQSVQSAPLPEEAPYMLLEDLQYNQTTNTHHPTQSNTYSAKHTLTDSD
PHSPAQTHVETVSSADTETHKDTQLEIHSDMLTVTDTHSVTHIEMEPGKHSDTHTAILVQ
LQQVSAVQAANTESNDFDVGLDPDISLADMYRWKVSAYAPCSSTCTTGITTSYALCVRYD
GTEVDDSYCDSLTRPEPTHEFCTGKECPPRWETSGWSECSRTCGEGVQYRTVRCWKMLSP
GLDSSVYDSLCLSHDLHKPANRKVCLGQSCGPQWEVSEWSECSARCGSRGVRTREVRCSM
EMSLCNKSSQPKQSQECEGPLCDRRWTVSDWGPCSGVCGEGRMVRAVTCRSSGGLVMSEE
QCDQALRPLAIHPCGDRNCAAHWVEQEWQQCNATCGRGVRWRQVVCAGLEDGVFKEFPDS
SCDQINKPETSSSCFQRPCSKWFTTSWSQCSKTCGSGVQVREVKCYQGEELVTRGHSCDS
ALKPEARQSCEIQSCPTEAPAAAPAASVAVDDSCQDKPTANCALVLKVKLCSHWYYRKAC
CQSCKAPRP
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtaacggagggttagctctcccggtttgctcctttctcctgctacacctcccg
gttctcccgctaacgaacaactggcccattaaggatagaagtgaagggagggtggagcag
cgtaacatccatctacaatcacacagccatggaagtctgaatgtcagacagatgagcaac
aaggaggaggtgtttcagtggtggggtgagtggtccagttggtcctcttgttccaggagc
tgtggaggaggagtgaggagtcaggagagacactgtctcatacagaggctgtccaccaca
cagaacataaacagctcatattgtgttggctctcctaaacagtaccagctctgtccaaac
aagccctgtcccaaccccagtgttagcttcaaacagcaccagtgttcccaatttaactct
aaagcctttggacgaaaatactaccagtggatacctctttatccagctgattacatcagc
atctccaataagccatgtgacctgcagtgtacaaccatcagtggtgagcgacagctccta
gttcctgcccacgacggtacattctgccgtgatactaaattccatggagtctgtattgag
ggaatatgtcagcctgtaggttgtgatggggagctgtacagcagtaagacagtggacaga
tgtggagtatgtggaggcaatggggcatcatgccagcgcatctctggatcatataggaag
gcactcacacagttaggctatgtgttcatcaccaacatcccagctggagccacagacatt
cagatcatagagagacacaagactgagaacatcctggccctgtcagatgaaggtggtcat
ttcttcttcaacgggaaaactgtctttgacaaccctcaaaacttccatgtggcaggaaca
gtgtttaaatatcgacgtccaagcagtgtgttctctgatgggctggagtacatcattgcc
cagggaccaacactgcagggcctcaatgtcatgtactacaacttgaacggaaagctaccc
catatcacctacgagtacaccatcccccttaagtcttatgacatgactgctgcagagggc
gtcactacaagtcctggccgctcccatctcaacttcacctataatgtggtaaatgaggac
gtgagagagggtcaggttaatttcaccaaccacagcagagggagcacgacatcttaccat
cattacaacacccagttggtagatgatgaccaatcagatatccagctgcaggaagatgag
gaggaggaagttgtgtgggaaatccgaacacccagccctccaccgccagcagccatgttg
gtctacagaccggctgatatcaccagtcatgtgttcagcctcaatgacgtggaagagcag
ggacctcctgcaccatctggctaccggagttcctccaattcgattgatgagccgtccact
actgatgataacactttagtgcactcttacccaggtagtcagagtgttcagtctgcaccc
ttgcctgaagaggctccatatatgctgctggaggacctacagtacaaccagacaaccaac
acacaccatcccacacagtcaaacacatactctgctaaacacacactcactgatagtgat
ccacattcaccagcacaaacacacgtggaaacagtgtcctctgcagacacagaaacacac
aaagacacacagttggaaatacactcagatatgctcacggttactgacacacactctgtt
acacacatagaaatggaacctggcaaacactcagacacacacacagccatcttggttcag
ctgcaacaggtgtctgcagtccaggcagccaacacagagagcaatgactttgatgtgggt
ctggacccagatattagtctggcagacatgtatcgctggaaggtttctgcttatgctcca
tgcagctcaacctgtacaacaggaatcaccactagctatgccctgtgtgttcgatatgat
ggtactgaagtggatgacagttactgtgactctctgaccaggccagagcccacacatgag
ttctgcactggaaaggaatgtcctccaagatgggagaccagtggttggagtgagtgctct
cgaacctgtggtgagggtgttcagtaccgcactgtgcgctgctggaagatgctgtcaccc
ggtctcgactcctctgtctacgattcattgtgtctgtcacatgacctgcacaaacctgct
aatagaaaggtctgcctgggccagagctgcggaccacagtgggaggtgtctgagtggtca
gagtgttccgcacgttgtggctctcggggtgttcggactcgggaggttcgttgctccatg
gaaatgagtttatgtaacaagtcctctcagccaaaacaaagtcaggaatgtgagggccca
ctctgtgacagaagatggacagtttctgactggggaccttgctcaggtgtgtgtggagag
ggaaggatggtgcgtgcagtgacatgtcgatcatcaggtgggctagtgatgtcagaggag
cagtgtgatcaagcactgcgcccgctggccatccatccctgtggtgacagaaactgtgcc
gcccactgggtcgaacaggaatggcaacagtgtaacgctacctgtggccgtggtgtgcgg
tggcgtcaggtggtgtgtgctgggctggaagatggtgtgttcaaagagtttccagatagt
agctgtgaccaaatcaacaaaccagagaccagctcctcctgcttccagagaccctgctcc
aaatggttcactacatcatggtcccagtgcagtaagacctgtgggagtggtgtccaggtt
cgagaagtcaagtgttaccagggagaggagctggtaaccaggggccacagctgtgactct
gccctcaagccagaagccagacagagctgtgaaatccagagctgtccaacagaagcacca
gcagcggccccagcagcatcagtagcagtggatgactcatgccaggataaaccaacggcc
aactgtgccctagtcctaaaggtgaaactgtgttcccattggtactacagaaaggcctgc
tgccagtcctgtaaggcaccaagaccctga
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