Lates calcarifer (barramundi perch): 108885349
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Entry
108885349 CDS
T04895
Symbol
rars1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108885349 (rars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108885349 (rars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108885349 (rars1)
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108885349 (rars1)
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
108885349 (rars1)
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108885349 (rars1)
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108885349 (rars1)
Prokaryotic type
Other AARSs
108885349 (rars1)
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108885349 (rars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
CCDC90-like
HPD
LisH_TPL
Nup54
YabA
CALCOCO1
Motif
Other DBs
NCBI-GeneID:
108885349
NCBI-ProteinID:
XP_018535177
UniProt:
A0A4W6G5R1
LinkDB
All DBs
Position
LG20:625066..648418
Genome browser
AA seq
660 aa
AA seq
DB search
MGDPVTDYTARLQQQEREIQSLSAEIESLKNPQDLSSSPRLDELREENAKLKYRLNILKR
SLQEERTYCSKSMMNINQRLQEVFGEAIRASCPELDNPPLAVTPNQQAKFGDYQCNSAMA
MAQMLKAKGIKVNPREIAEKIVQNLPDNELTQKTEIAGPGFINIHLKRSFVSKLLSNLLI
NGVQPPPLASKKRVVVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFLGHDVLRLNHVGD
WGTQFGMLIAHLQDKFPDYLTVSPPISDLQAFYKESKKRFDEEEDFKKRAYQCVVRLQSK
EPDFIKAWNLICDVSRREFQKVYDCLDIQIIERGESFYQEMMTEVVKEFEEKGLLQLDEG
RKVVFVPGQPIPLTVVKSDGGYTYDTSDLAAIRQRIFDEKADVIIYVTDSGQGTHFQVVF
AAAQMIGWYDPQVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEK
ERDKVLSQEELIKAQRSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLANIDEATLRKAAETTEVILDHDKEWKLGKCILRFPEILQKILDDLLLHTLCDY
LYELATTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLCEATAAVMAKGFDILGINPVQRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccctgtgaccgactacacagcccggctgcaacagcaggagcgggagatccaa
agtctttctgcagagatcgagagtctaaagaatccacaggacctgagttcatctccacgt
ctggatgagctgcgggaggaaaacgccaaactgaaataccgccttaacatcctgaagagg
agtctgcaagaggagagaacctactgcagtaaatccatgatgaacatcaaccagcggctc
caggaggtttttggcgaggcaatccgggcgtcctgtcccgagctggacaaccctcctctg
gccgtcacacccaaccagcaggccaagtttggagactaccagtgcaacagtgccatggcc
atggcccagatgctaaaggcaaaaggaatcaaagtgaacccgagggagatcgcagagaag
atcgtccagaacctcccagacaacgaactcacccagaaaactgagatcgcaggaccaggg
ttcatcaacatccacctgaagaggtcgtttgtgtccaaactgctgagcaacctgctgatc
aacggggtgcagccgccgccactggcctccaagaagagggtggtggtggatttctcctct
cccaacatcgccaaagagatgcacgtaggtcacctgcgctccaccatcatcggggagagc
atgagtcgactgtttgagtttctgggccacgacgttctcaggttgaaccatgtgggagac
tgggggacccagtttgggatgctaatcgcccacctgcaggataaattcccagactacctg
accgtctcgccgcccatcagtgacctgcaggccttctacaaagagtcgaagaagcgtttc
gacgaggaggaggacttcaagaaacgagcgtaccagtgtgtcgtcagactgcagagcaaa
gagccggacttcatcaaagcctggaatctcatctgtgacgtctccaggagagagtttcag
aaggtttacgactgcctggacatccagatcatcgagaggggagagtcgttctaccaggaa
atgatgacggaggtggtgaaggagtttgaggagaaaggtctactacagctggacgagggt
cgcaaggttgtcttcgtcccaggtcagcccatccccctcaccgtcgtcaagtcagacggc
ggctacacctacgacacttcggacctcgcggccatccgccagcggatcttcgacgagaag
gccgacgtcatcatctacgtcacagacagtgggcagggcacacacttccaggtggtgttt
gctgcggctcagatgattggctggtacgatccccaggtgacccgagtggagcacgccggc
tttggagtggtgctgggggaggacaagaagaagtttaagacccggtctggagacacggtg
aggctgatggacctgctggaggaggggctgaagaggtcaatggacaaactgaaagagaag
gagagagacaaggtcctgagccaagaggagctgattaaagcccagaggtctgtcgctttt
ggttgtatcaaatacgccgatctctcccacaaccgcatcaacgactacgtcttctcgttc
gacaagatgctggacgaccggggcaacacagcggcatacctcctctacgccttcacccgc
atcaggtccatcgcccgcctggccaacatcgatgaggccacgctgaggaaagcggcagag
accacagaggtcatcctggaccacgacaaggagtggaagctggggaagtgcatcctgcgc
ttccccgagatcctgcagaagatcctggatgatctactgctccacacgctctgcgactac
ctgtacgagctcgccaccaccttcaccgagttctacgacagctgctactgcgtggagaag
gacagacagacaggtgaggtggtgaaggtgaacatgtggaggatgctgctttgcgaagcc
acagccgccgtcatggccaaaggcttcgatatcttgggcatcaaccctgtccaaaggatg
tga
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