Lates calcarifer (barramundi perch): 108885362
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Entry
108885362 CDS
T04895
Name
(RefSeq) tropomodulin-1 isoform X3
KO
K10370
tropomodulin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108885362
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108885362
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Capping proteins
108885362
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Gene cluster
GFIT
Motif
Pfam:
Tropomodulin
LRR_6
Paralemmin
Ribosomal_S13
Motif
Other DBs
NCBI-GeneID:
108885362
NCBI-ProteinID:
XP_018535195
UniProt:
A0AAJ7V3S9
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Position
LG5:20504686..20525924
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AA seq
377 aa
AA seq
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MSVMRKEMEKYRDIDEDELLKKLSEEELQRLEDELEELDPDNALLPAGMRQKDQTKKAPT
GTFQRDNLLAHLEKQAKEHPDREDLVPFTGEKRGKAWVPKKRVDPIIENVTLEPELEEAL
ASATDAELCDIAAILGMHTLMSNQQYYEALASSTIVNKQGLNSVIQCTQYKPVPDEEPNS
TDVEDTLLRIKRNDPDLVEVNLNNIKNIPIPTLKAYAEALIKNTVVERFSIVGTRSNDPV
AFALAEMLKVNTTLKSLNVESNFITGTGILALIESLQNNTTLLELKIDNQSQPLGNKVEM
EIASMLEKNTTLLKFGYHFTQQGPRLRGSNAMMNNNDLARVVRSESDGSFTLTLSVPELE
RAFGKKFKSKTNKKEKA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgatgaggaaggagatggagaagtacagggacatagatgaggacgagctgctg
aagaaactctctgaggaagagctgcagcggttagaggatgaattagaggagctggatcct
gataatgcattgttaccagctgggatgcggcagaaagaccagactaagaaagctccgacg
ggaacgtttcagagggataaccttctggcccatctggagaaacaagccaaagagcatcct
gacagagaagacctggtgcccttcacaggggagaagagagggaaagcctgggtgcctaaa
aagagggtggaccccatcatagagaatgtgactctggagccagagctagaagaagccctt
gctagtgctactgatgctgaactgtgtgatattgcagctatcctgggtatgcacaccctg
atgagtaaccagcagtactacgaagccctggccagcagcaccatagtcaacaagcaaggc
ctcaacagtgtgatccagtgcacccagtataaacctgtccctgatgaggagcccaactcc
actgacgtagaagacaccctgttgagaataaagaggaatgaccctgacctagttgaggtc
aatctcaacaacatcaagaacatccccatcccgactctgaaggcgtacgctgaggctctg
ataaagaacactgtggtggagaggttcagtatcgtaggaaccagaagcaatgaccccgta
gcatttgccctggcagagatgttgaaagtgaacacgacgctgaagagcctgaatgttgag
tccaacttcatcacagggactggaatcctggccctcatagagtcactgcagaataacacc
acactactggagctcaagatagataatcaaagccagccgttaggcaacaaggtcgagatg
gagatagccagcatgctggagaaaaacaccacgctgttgaagtttggctaccatttcact
cagcagggccctcgcctccgaggctccaacgccatgatgaacaacaacgacctggcccgg
gtcgtcaggtcagagtcggatggctccttcacccttactctgtctgtccctgagctggag
agagccttcgggaaaaagttcaagtccaagactaataagaaagagaaggcttga
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