Lates calcarifer (barramundi perch): 108885376
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Entry
108885376 CDS
T04895
Name
(RefSeq) vacuolar protein sorting-associated protein 37A isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108885376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108885376
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108885376
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
108885376
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108885376
Exosomal proteins of colorectal cancer cells
108885376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
UEV
DUF4349
Motif
Other DBs
NCBI-GeneID:
108885376
NCBI-ProteinID:
XP_018535222
UniProt:
A0A4W6D496
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Position
LG5:20719015..20727214
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AA seq
395 aa
AA seq
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MNWLFPLSKGSGPLPPLNSLQQQRQRQIESLKAAHPSLAEIQKDVEYRIPFTVNNSTISV
NILLPPQFPQEKPVVSVYPPVGHHLVDSNNGTMITSPLITNFGMHSDLGKVIQSLLDEFW
KSPPALMSTGPAGFPYSMYKPSGMAPYPTQAFHYGPRHMGPSQTPPPGPGPAPSPAPMPH
PGVDSAHGPPRAPAPYGLITDLPLPVPTGDSQAGLNGHMYKMPEIPESFPELCDMNLTQL
SDMSENEDVLLEFFVSLPQLKQITTDKEELVTSIVDMAKKNLQMEPQLERKREEMLYKYE
QLTQMKSAFETKMQRQHELSESCSLSTLQARLKVAAHQAEEESEETAENFLEGRTDIDEF
LTSFMEKRTLCHSRRAKEEKLQQSINTHGQFPTSH
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaactggcttttccccctgtccaaaggctccggacctctccctcctctgaacagccta
cagcaacaaagacagcggcagatcgagtcgctcaaagccgctcaccccagccttgcagag
atccagaaggatgttgaatacagaataccctttacagtcaacaactccaccattagtgtt
aacattctgctacctcctcagttccctcaggagaagccagtggttagtgtctatcccccc
gttggtcatcatttagtcgacagcaataatggcaccatgatcactagtcctctcatcact
aattttgggatgcactcagatctgggtaaggttattcagagtctgctggatgagttctgg
aaaagtcctcctgccttgatgtctactggtcctgctggctttccatacagtatgtacaag
ccttcaggcatggctccttaccccactcaggctttccactacggtcctcgtcacatgggt
cccagtcagacaccgccccctggtccgggcccagctccctctccagctcccatgcctcat
ccaggggtcgatagtgcccacgggcctcctcgtgctccagctccatatggactgattact
gacctgccgctgcctgtacctactggagactcacaggctggactgaatggacatatgtac
aagatgcctgagattcctgagtcttttcctgaactctgtgacatgaatctgacccagttg
tcagatatgtctgaaaacgaggatgtgctactggagttctttgtgagtttaccacagctc
aagcagatcaccactgataaagaagagctggtcaccagtatagtggacatggctaagaag
aaccttcagatggagccacagttggaaagaaaaagagaagaaatgctctacaagtacgaa
cagctgactcagatgaagtcagcctttgagacaaagatgcagagacagcatgaactcagt
gagagttgcagtcttagtactttacaggctcggttaaaagtcgcagcccaccaggcagag
gaggagtcggaggagacggctgaaaacttcctggagggccgcaccgacatagacgaattc
ctgaccagcttcatggaaaagagaacgctttgccacagcagaagggccaaagaggagaag
ttgcaacagtccatcaacacacatggacagtttcctaccagccactag
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