Lates calcarifer (barramundi perch): 108885385
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Entry
108885385 CDS
T04895
Symbol
pnpla6
Name
(RefSeq) patatin-like phospholipase domain-containing protein 6 isoform X3
KO
K14676
lysophospholipid hydrolase [EC:
3.1.1.5
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
108885385 (pnpla6)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.5 lysophospholipase
108885385 (pnpla6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
NTE_Ploop
cNMP_binding
Patatin
MscL
DUF4736
STE2
Motif
Other DBs
NCBI-GeneID:
108885385
NCBI-ProteinID:
XP_018535232
UniProt:
A0AAJ7PPK6
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All DBs
Position
LG5:20793068..20821203
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AA seq
1348 aa
AA seq
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MGQSTSEQEVQANTPTDGFDNIKSFVEEELQTSMMVGMVIGAGIAIVLIAILIFFILRRI
QLRNLEAQEAPKYRFRKRDKVMFYGRKIMRKVSQSTSSLVGTSSSSRPRLKKKQKMLNIA
KKILRFKKEVPTLQAKEPPPSVLEADLTEFDVANSHLPSEVLYMLKNVRVLGHFEKPLFL
ELCKHMVFVQFQQGEYVFRPGQPDSSIYVVQDGKLELCLTGTDGKESVVKEVYPGDSVHS
LLSILDVITGHQKPYKTVSARAAEVSTVLRLPVEAFLSIFEKYPESLVRVVQIIMVRLQR
VTVLALHNYLGLTNELFSHEMQPSRLPPPSPHPTRTSPIRHGKRFGSLTVSEEHREAAVK
SEATGGEQGKDGATVPTLSRTISMPVDIAGIQKSLRSDFDMAYERGRISVSAEDGNTPPT
FTRSVSQDQRERRVTVDEVPSGIYLYPEEEPGVDNIFTPISSRSSAALFEEAQKEVLKLM
RIEDPSLLNGRVTLHHAKAGAVLARQGDQDVSLHFVLSGCLHVYQRMINKQEAVCLFVTH
PGEMVGQLAVLTGEPLIFTIKAVRDCTYLKISKSDFYEIMREQPSVVLSAAHTVAIRMSP
FVRQMDFAIDWMAVEAGRALYRQDDQSDCTYIVLNGRLRSVIRKANGKKELVGEYGRGDL
IGVVEALTRQPRATTVHAVRDTELVKLPEGTLNNIKRRYPQVVTRLIHLLGQKILGNLQQ
GRGPFSGSALSLPTMSASADVTNPASNLSTVAVLPVCDEVPINAFNLELSHALSAIGPTL
LLTSDIIRERLGASALDSIHEYRLSGWLAQQEDINRIVLYQTDNSMTPWTQRCIRQADCI
LIVGLGDQEPTLGELEQMLENTAVRALKQLVLLHREDGPGPSRTVEWLNMRSWCSGHLHL
KCPRRVFSRRSPSKLREVYEKVFEKTADRHSDFSRLARVLTGNSIALVLGGGGARGCSHV
GVIKAMEESGIPIDIVGGTSIGSFIGALYAEERSAVRTKQRAREWSKAMNSVFKTVLDLT
YPITSMFSGSAFNTSIYKVFQDKQAEDLWLPYFNVTTDITASAMRVHQDGSLWRYVRASM
TLSGYLPPLCDPKDGNLLMDGGYINNLPADIARNMGARTVIAIDVGSQDETDLCNYGDCL
SGWWLLWKRINPWAEKVKVPDMAEIQSRLAYVSCVRQLEVVKKSAYCEYIRPPIDRFKTM
DFGKFDEIYDVGYQHGKLVFTGWARGDIIENMLKDHHSADYNDSKRTDSCTCPGADFTDL
AEIVSRIEPVQSYVAAEAEESDCLTEYEEDGMDTVREEEGEEEEEEAEDPEDHSPGEWGQ
NGVFQTDEEKSVRQRRKLTSDTSEVSDC
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgggacagagtacctcggaacaagaggtccaggcaaacacccccacggacgggtttgat
aacatcaagtcatttgtggaagaggaactacagacgagcatgatggtggggatggtgata
ggagcaggcatagccatagtcctcatcgccatcctcatcttcttcatcttgcggaggatc
cagcttcgaaacctagaagctcaggaggctcccaaataccgcttccgcaagagggacaaa
gtcatgttctacggacgaaagatcatgcgcaaagtatcccagtctacctcttccctggtg
ggtacatcctcttcctctcggccacgcctcaagaagaagcagaagatgctcaacattgcc
aaaaagatcctgcgctttaagaaggaggtgcccaccctccaggctaaggagccccctcct
tcagtgctggaggcagacctcaccgaatttgatgtggccaactcccacctcccctctgag
gtgctctacatgctcaaaaatgtccgtgtgctgggtcactttgagaaacccctcttcctg
gagctgtgtaaacacatggtgtttgtgcagttccaacaaggggagtacgtcttcaggcca
ggccagcctgacagcagcatctacgtggttcaggatggaaaactagaattgtgccttact
ggaacggatggcaaagagagtgtcgtgaaggaggtctacccaggagacagtgtccacagc
ctcctcagcatcctggatgtcatcacaggccaccagaagccttataaaacggtgtcagca
cgggctgcagaggtttccactgttctccgtttacctgtagaggccttcctctctatattt
gagaagtaccctgagagcctggtgcgagtagtacagattattatggttcgtctccaaaga
gtaacagtcctagccctgcacaactatcttggactcactaatgagctcttcagccatgaa
atgcagccatcgcgtctgccacctccgtcaccccacccaactcgcaccagtcccatccgc
catggcaagcgctttggcagcctgacagtgtctgaggagcatcgggaagctgccgttaag
agtgaagctacaggaggagaacaagggaaggatggagcaacagtgccaacacttagcaga
accatctccatgcctgtggacattgctggtatacagaaaagtctgagatcagactttgac
atggcatatgaaaggggacggatctctgtctctgcagaggatggaaacactcctcccacc
tttactcggtctgtgtcccaggaccagcgggagaggagggtgacagtagatgaggttccc
tcagggatctacctgtatccagaagaagagccaggagtggacaatatttttacacctata
tccagtcgatccagtgctgctttgtttgaggaagctcagaaagaggttctcaaactcatg
aggattgaggacccatctttgttaaatgggagagtgactctgcaccatgcgaaagctgga
gctgtcttagccagacaaggagaccaggatgtgagtctgcactttgtcctgtctgggtgt
ctgcatgtctaccaacggatgatcaataaacaggaagctgtgtgcttgtttgtaacccac
ccgggggagatggtgggccagcttgctgtgctcacgggagaacccctcatcttcaccatc
aaggccgtccgagactgtacttacctcaagatttcaaagtcggatttctacgagatcatg
agggagcagcccagtgtggtgctgagtgcagcccacacagtggcgatccgcatgtcccct
tttgtcaggcagatggattttgctattgactggatggctgtggaggctggcagagccctc
tacagacaagacgaccagtcagactgcacctacatcgtactgaatggtcgtctgcgttca
gtcatccgcaaggcaaatggcaagaaagaactggttggggaatacggcaggggagacctc
attggagtggttgaggctttgaccagacagccaagagccaccactgtccacgctgtgaga
gacacagagctggtcaagctgcctgagggaacactcaacaacatcaaaagacgatatcca
caggtggtaacgaggttgatccacttgttaggccagaagattctggggaaccttcagcag
ggtcgcgggccattctcaggctcagccctgagtctgcccactatgtcagctagtgcagat
gtaaccaaccccgccagcaacctctctactgtggctgtgctgccggtatgtgacgaggtg
ccgatcaacgcgttcaacctggagctcagccatgccctcagtgctattgggcccactctg
ctattaaccagtgacataatcagagagcgtctgggtgcttctgctttggacagtatccat
gagtaccgtctgtctggctggctggcccagcaggaggacatcaatcggattgtcctttac
caaactgacaacagcatgaccccatggactcagcgctgcatccgccaggctgactgcatc
ctcatcgttggcctgggggatcaggaacctaccctcggagagttggagcagatgttggag
aacacagcggttcgggctctgaagcagctggtccttctacacagagaggatgggccaggc
ccctccaggacggtcgagtggctcaacatgcgtagctggtgctccggacatctgcacctt
aagtgtcctcgcagggtcttctctaggcgcagtcccagcaaattgagggaggtatatgaa
aaggtgtttgagaaaacagcagacaggcacagtgatttctctcggctggcccgagtcctg
acgggaaacagcatcgccctggtgctgggaggaggtggagcaagaggctgctctcatgtg
ggtgtgatcaaagctatggaggaatccggcattcctattgacatagtaggtgggacctcg
attgggtcattcattggtgcgctgtacgctgaggagaggagtgctgtcagaaccaaacag
agagccagagagtggtccaaggcaatgaactcagtttttaaaacagtcctggacctgacc
tatcccatcacctccatgttctctggctctgcctttaacaccagcatctataaagtgttc
caggacaagcaagccgaggacctatggttgccctacttcaacgtcactactgacatcacg
gcctcggccatgcgtgttcatcaggatggctctctgtggcgctatgtgcgggcgagcatg
accctctcagggtacctgccgcctctctgcgaccccaaagatggcaacttgctaatggac
ggtggctacatcaacaacctgccagcggacattgcaaggaacatgggtgccagaacagtc
attgccatcgacgtgggaagccaagatgagaccgacctctgtaactatggcgactgcctg
tctggctggtggttgctgtggaaacggatcaatccctgggcagagaaagtaaaggtgcca
gacatggcagagatccagtctcggctggcatacgtgtcttgtgtgcggcagttagaggtg
gtgaagaagagtgcctactgtgagtacatcagaccacccatcgaccgctttaagaccatg
gactttggcaaatttgacgaaatctatgatgttggctaccagcacggcaagttggtgttc
actggctgggcccgaggtgacatcatcgagaacatgctgaaggaccaccattcagccgac
tacaatgacagcaaaagaactgactcttgcacgtgtcctggagctgacttcactgacctc
gcagagattgtatccaggatagagccagtccaaagctatgtagctgcagaagcagaggag
tcagactgtctgacggagtacgaggaagacgggatggacacagtgagagaggaggagggg
gaggaagaggaggaagaggcagaagatcctgaggaccactcccctggagagtgggggcag
aatggagtcttccagactgatgaggagaaatctgtgaggcaacgcaggaaactcacaagt
gacacctctgaagtgtctgactgctga
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