Lates calcarifer (barramundi perch): 108885387
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Entry
108885387 CDS
T04895
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
lcf
Lates calcarifer (barramundi perch)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_13
Motif
Other DBs
NCBI-GeneID:
108885387
NCBI-ProteinID:
XP_018535237
UniProt:
A0A4W6DB48
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Position
LG5:complement(20894848..20909503)
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AA seq
582 aa
AA seq
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MSSTLGKEKDSKEKDPKGGPAGKEREKEAKALASLVKDGGKETKTKGKDAKDGKKDTSSS
TPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLARCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRARVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRRLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcgaaagagaaggaccccaaaggtggtcca
gcggggaaagaaagggaaaaggaagccaaggctctggccagcttagtcaaggatggtggc
aaagaaacgaagaccaaagggaaagatgccaaagatggaaagaaggacaccagcagctca
acaccaggtgttgccttctctgttgacaacacgataaagcggccaaacccggcaccaggt
acacgcaagaagtccagtaatgccgaggtgatcaaagaacttaacaagtgcagggaggag
aactcaatgagactggacctatctaaacggtccattcacatgctgcccacctccattaag
gagttgacgcagctggctgaactctacttatacagcaacaagctgcagagcctgccagct
gaggtgggttgcctatcaggcctggtcactttggccttgagtgagaactccctgaccagt
ttgcctgactccctcgactcccttaagaagcttcgcatgctcgacctccggcacaacaag
ctgagagagatacccgctgtcgtctaccggctgacatctctgaccacgctgtacctgcgc
ttcaaccgtatcacaacagtagagaaggacatccgaaacctatccaagctcactatgctc
agcatccgtgagaacaagattaaacagctgcctgcagagataggggagctatgcaacctt
attactctggatgttgcccataaccagttggaacacctaccaaaagagattgggaattgc
acacaaataaccaacctcgacttgcagcacaatgagctcttggacctcccagagactata
gggaatctggccagcataaatcgtttaggtctgagatataatagattgtcagccatcccc
agatctttagccagatgtcgagaactggaggagctaaacctggaaaacaacaacatttca
gtgttgccagagggcctactttcaagtttggtgaacctgacaagtctaacactggcgagg
aactgcttccagtcgtatcctgttggtggaccatcccagttctccaccatctactccctc
aacatggagcacaaccgtatcaacaagatcccgtttggtatcttctccagggccagagtg
ttaagcaagcttaacatgaaggacaaccagttaacgtctctgccattggactttggcaca
tggactagcatggtcgagcttaacctagccactaatcagctgacaaagatcccagaggac
gtctgtggtctagtctctctggaggtgttaatattgtccaataatcttctcaagaagttg
ccacatggtattgggaatttgagaaggctacgagagctcgacttggaggaaaacaagttg
gaatctctacctaatgaaattgcttatcttaaagatttacagaaattggtgttgacaaat
aatcagctgactacattacccagaggcatcggccacctcaccaacttgactcatctgggt
ttgggagagaacctgctgcaacaccttcctgaggagattggtacactggagaacctggag
gagctgtacctcaacgacaaccccaacctgcacagccttccgttcgagctggccctctgc
agcaagctgtccatcatgagcatcgaaaactgtcccctcagccacctgccaccccagatt
gtcgcgggaggcccctccttcatcatccagttcctcaagatgcagggaccataccgtgcc
atggtctga
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